Heatmap: Cluster_715 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-1.91 -1.12 0.23 1.12 0.66 0.48 -1.7 -3.08 -2.04 -0.66 -1.58 -2.94 0.37 0.93 1.02 0.89 0.27 0.34 -1.25 -1.1 -1.33 -0.75 2.54 -2.08 -2.19 1.72 -2.63 -2.11 -2.19 -1.91 -1.68
Bra023786 (CML11)
-1.62 -1.0 -1.56 1.66 -0.49 -0.69 -0.98 -1.27 -0.96 0.39 -0.52 -0.86 0.54 0.45 0.14 -0.05 -0.01 0.5 -0.37 -0.53 -0.55 -0.62 2.77 -1.65 -1.34 1.21 -1.45 -1.2 -2.06 -2.04 -2.99

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.