Heatmap: Cluster_866 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra012998 (RLK1)
-2.53 -2.25 -1.37 -3.48 0.09 0.06 -0.79 -1.55 -0.41 -0.43 -0.87 0.34 -1.95 0.02 0.5 0.89 0.11 -0.47 -0.53 -1.08 0.2 -0.54 2.66 0.1 0.7 -0.73 0.22 -0.18 0.09 0.19 -0.8
Bra012999 (RLK1)
-2.3 -1.54 -0.48 -2.0 0.85 0.26 -0.45 -1.42 -0.08 -0.09 -0.58 0.73 -1.86 -0.14 0.05 1.04 0.49 -0.31 -0.96 -0.61 -0.04 -0.4 2.73 -0.58 -0.71 -1.43 -0.37 -0.5 -0.52 -0.13 -1.33

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.