Heatmap: Cluster_729 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
0.02 0.11 -0.08 0.01 0.33 0.21 0.01 -0.03 -0.21 -0.26 -0.19 -0.16 -0.03 0.02 0.38 -0.07 -0.07 -0.25 -0.28 -0.2 -0.32 -0.19 0.56 0.13 0.01 -0.11 0.08 0.03 -0.11 -0.2 0.38
Bra021192 (PPR4)
0.83 -0.06 -0.96 0.94 0.24 -0.46 -0.69 0.47 -1.16 -1.2 -1.22 -1.72 -0.56 -0.28 0.41 0.34 0.1 -1.05 -1.04 -0.1 -1.57 -1.83 1.62 -0.01 0.37 -1.02 -0.03 -0.85 -0.06 0.18 1.65

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.