Heatmap: Cluster_841 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
0.99 1.0 0.7 0.13 0.44 -2.59 -1.55 -1.66 -1.84 -0.99 -1.14 -1.42 0.8 -0.88 -0.85 -0.4 -0.77 2.87 0.24 -0.97 -0.96 -1.68 0.08 -0.99 -0.82 0.6 -1.19 -0.2 -0.73 -0.64 -1.64
0.59 0.83 0.65 0.81 0.29 -0.62 -1.18 -0.94 -1.06 -0.65 -0.79 -1.01 -0.11 -0.58 -0.5 -1.13 -0.61 2.65 -0.16 -0.77 -0.56 -0.79 -0.34 -0.88 -0.84 0.48 -0.42 -0.42 -0.5 -0.38 -0.53
Bra036143 (BXL1)
0.53 0.84 1.41 1.0 - -6.21 -2.26 -1.12 -3.23 -2.64 -2.56 -3.11 1.66 -4.89 -4.93 -1.82 -1.34 3.8 -0.32 -2.46 -3.14 -2.29 -1.16 -1.93 -2.59 0.2 -2.24 -2.28 -3.48 -2.88 -3.38

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.