Heatmap: Cluster_3 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
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- - - - - - - - - - - - - - - - - - - - - - 4.95 - - - - - - - -
-4.0 -5.25 -6.58 -7.66 -7.96 -7.0 -4.31 -3.67 - - - - -5.55 -5.34 -5.48 -6.85 -6.81 4.33 - -7.19 -8.17 -6.84 3.39 - -5.27 - - -8.22 - -6.46 -7.52
- - - - - - - - - - 1.73 - 2.79 - - - - 3.62 2.49 1.53 - - - - - - - - - - -
- - - - -2.77 -1.9 -2.52 -3.31 -1.97 - - -2.11 0.7 -0.99 -1.77 -3.1 - 3.87 -3.74 -3.7 - - 3.36 -2.08 - - -3.3 -1.84 -3.41 -3.29 0.48
- - - - - - - - - - - - 3.73 - - - - 4.15 - - - - - - - - - - - - -
- - - - - - - - - - - - - - -1.22 - - 3.86 - - - - 3.99 - - - - - - - -2.44
- - - - 1.3 1.41 - - - - - - - - - - - - - - - - 4.57 -0.12 - - - - - 0.22 -
- - - - 1.3 1.41 - - - - - - - - - - - - - - - - 4.57 -0.12 - - - - - 0.22 -
- - - - 1.14 0.3 - -1.85 - - - - - 1.15 0.7 -1.92 - 3.05 -2.28 - - -0.39 3.18 -2.14 0.88 -2.22 - - -0.95 - 1.03
-4.5 -4.85 -3.75 -3.75 -4.01 -4.84 -2.24 -3.41 -3.51 -2.9 -4.2 -3.51 -3.77 -3.44 -1.86 -4.33 -4.73 3.58 -2.21 -2.36 -4.68 -2.98 4.01 -2.92 -3.89 -3.74 -3.07 -5.3 -2.68 -3.06 -2.54
- - - - - - - - - - - - - - - - - - - - - - 4.95 - - - - - - - -
0.39 0.78 -0.16 0.01 -0.69 -0.52 -2.89 -1.78 -3.06 - - -1.3 0.89 -0.69 -2.03 -1.3 -1.71 1.81 -3.44 -1.84 -1.09 -0.42 3.76 -1.77 -1.69 -1.85 -1.51 - - -1.24 -3.28
-1.13 -0.28 - -1.52 -0.57 -0.7 -3.87 - - -3.98 -2.27 - 1.66 1.23 -0.02 -2.06 -2.88 3.45 - -1.68 -1.27 -1.57 2.71 -1.96 -0.96 -4.04 -1.87 - - -1.78 -0.15
- - - - - - - - - - - - - - - - - 2.76 - - - - 4.51 - - - - - - 0.57 -
-0.59 -0.72 0.02 0.2 -0.09 0.39 -0.63 -0.44 -0.94 -0.8 -0.59 -1.41 -1.09 -0.38 -0.14 -1.36 -1.29 1.98 -0.99 -0.8 -0.68 -0.72 2.82 -1.1 -0.87 -0.9 -0.72 -0.79 -0.32 0.14 -0.13
-1.88 0.56 0.31 - -0.4 -1.52 -3.33 -0.22 -3.43 -3.1 - -0.02 -0.09 - - -2.63 -3.21 2.52 0.11 - -1.51 - 3.91 - - - -1.42 -1.51 - -1.57 -1.85

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.