Heatmap: Cluster_619 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra010083 (DOM1)
-0.86 -0.41 -0.31 -0.66 -0.16 0.34 0.49 1.16 -1.2 -0.8 -0.86 -1.35 0.12 -0.2 0.79 0.2 0.17 0.62 -0.46 0.34 -0.06 -0.55 1.97 -0.79 -0.21 -0.26 -0.48 -1.08 -0.78 -1.21 -0.04
-0.36 -0.2 -0.2 -0.4 0.03 0.38 0.19 1.07 -1.25 -0.74 -1.46 -1.3 0.52 0.24 0.65 0.05 0.09 0.57 -0.28 0.02 -0.05 -0.33 1.81 -0.37 -0.4 -0.51 -0.42 -1.03 -1.17 -1.11 0.15

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.