Heatmap: Cluster_157 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
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-1.53 -1.63 -0.08 -1.78 -2.53 -2.93 -1.68 -1.09 -0.88 -1.53 -0.33 -3.09 -1.56 -2.02 -1.12 -0.39 -1.74 4.1 -0.51 -1.27 -1.41 -1.09 0.72 -0.92 -0.41 -1.33 -1.42 -2.08 -1.28 -1.81 -1.32
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- - - - - - - - - - - - - - - - - 4.83 - - - - 1.37 - - - - - - - -
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- - - - - -2.2 - - - - - - - - - - - 4.94 - - - - -2.69 - - - - - - - -
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-0.95 -1.65 -0.95 -0.95 -1.65 -0.5 -0.98 -1.69 -1.3 -0.97 -0.74 -2.18 -0.71 -1.1 -1.18 -1.73 -1.23 4.11 -0.95 -2.22 -1.12 -1.06 -0.43 -1.05 -0.75 -1.97 -1.28 -0.61 -0.84 -1.31 -1.67
-6.69 -3.51 -4.82 -3.37 -4.63 -4.64 -3.63 -3.44 -4.88 -4.35 -4.65 -6.06 -4.94 -5.97 -5.55 -5.13 -6.25 4.85 -5.03 -6.06 -5.52 -5.63 -0.0 -4.93 -5.2 -5.62 -7.32 -6.07 -3.35 -3.03 -4.33
-1.43 -1.61 - -1.7 -1.14 -1.51 -1.68 -2.44 -0.91 -2.86 -1.29 -2.01 -0.1 -1.52 -1.62 -0.56 -2.75 4.37 -0.58 -1.72 -0.64 - -4.4 -2.02 -4.6 -1.97 - -1.31 -2.01 -2.0 0.25
- - - - - -4.11 - - - - - - - - - - - 4.87 - - - - 0.8 - - - - - - - -
-3.51 -2.93 -3.75 -3.89 -1.48 -1.27 -3.35 -3.73 -2.97 -2.91 -2.67 -3.34 -2.2 -0.66 -1.24 -2.69 -3.1 4.54 -1.62 -2.51 -2.75 -2.53 0.93 -2.56 -2.9 -2.61 -2.87 -3.53 -2.08 -2.53 -1.02
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-3.79 -0.95 -2.29 -0.4 -1.35 -4.2 -1.5 -2.58 -1.45 -0.97 -0.19 -3.99 -1.33 -1.95 -1.66 -2.32 -1.51 4.26 -1.83 -1.17 -0.47 -1.07 0.54 -0.44 -1.67 -0.89 - -1.96 -2.66 -1.86 -1.65
- - - - -4.64 -4.52 -4.27 -4.11 - - -4.22 -3.55 - -4.15 -4.08 -3.17 - 4.84 - - -1.88 - -1.3 -2.17 - -2.35 -3.25 -4.08 -3.04 -3.25 -2.0
- - - - - - - - - - - - - - - - - 4.81 - - - - 1.54 - - - - - - - -
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- - - - - - - - - - - - - - - - - 4.95 - - - - - - - - - - - - -
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- - - - - - - - - - - - -4.98 - - - - 4.8 - - - - 1.6 - - - - - -4.4 - -
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-2.42 -1.11 -1.01 -1.1 -1.24 -1.38 -3.95 -2.12 -1.33 -2.51 -1.23 -1.73 -1.47 -1.13 -0.13 -2.36 -2.23 4.12 -2.86 -1.98 -2.36 -1.89 2.18 -1.93 -1.6 -5.7 -3.43 -3.54 -1.27 -0.97 -1.46
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-2.12 -1.84 -2.37 -3.01 -2.15 -2.79 -3.32 -3.65 -3.56 -3.53 -3.2 -3.43 -0.84 -2.22 -2.53 -2.97 -3.0 4.47 -2.7 -3.08 -2.76 -2.78 1.78 -2.53 -2.26 -2.39 -2.32 -2.55 -2.41 -2.21 -1.07
-6.09 -5.5 -7.18 - -4.32 -4.92 - -4.13 - - - - -4.43 -4.32 -5.74 -7.32 -5.7 4.59 - -7.67 - - 2.67 - -7.57 -6.64 - -6.45 -3.75 -5.45 -4.57
-3.41 -0.37 -1.43 -0.43 -0.76 -5.17 -3.46 -4.09 -6.26 -3.93 - -6.32 -1.66 -3.97 -2.51 -4.42 -3.56 4.49 - - -4.33 -4.21 2.19 -5.16 -3.43 -6.31 -3.79 -4.53 -5.14 -3.05 -6.19
-1.0 -0.58 -1.2 -2.42 -3.01 -3.83 -4.68 - - -4.32 -5.61 -6.71 -4.08 - -5.95 -3.93 -5.15 4.66 -5.55 -5.58 -4.73 -3.85 1.13 -4.6 -6.76 -5.01 -5.92 -4.44 -1.02 -1.93 -3.13

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.