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Heatmap: Cluster_500 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-3.87 -1.03 -1.12 -3.92 -0.96 -0.32 - -0.84 -2.73 -0.19 -3.13 -1.22 0.13 0.16 0.06 -0.77 -4.19 0.69 0.04 -0.76 -0.6 -0.91 2.12 -1.1 -0.44 -1.78 -0.56 -3.46 0.59 2.01 2.59
-1.36 -3.08 -4.77 -1.43 -0.65 -0.46 -0.6 -1.78 -0.57 -0.03 -0.35 -0.45 0.16 0.68 1.06 0.07 -0.88 -0.6 0.02 -0.13 -1.26 -0.16 1.89 0.16 -0.05 -0.31 -1.24 -1.54 0.37 1.16 1.77
-0.55 -2.05 -1.48 -0.25 -0.63 -1.24 0.07 0.34 0.09 -0.66 -0.14 -0.97 0.76 0.85 0.74 -0.59 -0.22 0.58 -1.19 -0.41 -0.68 -1.02 1.01 0.03 -1.15 -0.63 -3.62 -1.92 -0.03 1.37 1.94

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.