Heatmap: Cluster_955 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra010670 (GLTP)
-0.88 -0.83 -2.37 -0.39 1.19 0.82 1.3 0.96 0.78 -0.05 -1.03 0.62 -0.01 0.49 1.97 0.41 0.05 - - 1.63 0.2 -1.23 -0.84 - -0.77 - -0.3 -2.0 - -2.19 -
0.15 -1.5 0.12 - -0.22 0.49 0.84 2.13 -1.96 -0.33 0.14 0.26 0.73 1.08 1.76 0.68 0.6 - -1.07 1.03 0.21 -0.9 -0.76 - - - -1.67 -1.65 -0.64 - -1.72

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.