Heatmap: Cluster_385 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-1.31 -1.17 -0.38 -0.68 -0.03 0.26 0.85 0.79 -0.23 0.07 -0.85 -0.99 1.72 -0.46 -0.69 0.34 -0.12 1.0 -1.02 0.86 -0.27 -0.41 0.58 -0.25 -0.32 -0.47 -0.42 -0.32 -0.07 -1.11 -0.87
-1.59 - - -1.25 0.06 0.12 1.16 1.76 0.32 -1.41 -0.72 -0.74 2.44 -1.43 -2.43 1.71 1.59 -0.48 -0.66 0.59 -2.76 -0.67 -2.1 -0.46 -1.51 -3.77 -0.94 - -1.75 -1.45 0.27

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.