Spov3_chr3.03204 (PUB49, ATPUB49)

Aliases : PUB49, ATPUB49

Description : E3 ubiquitin protein ligase *(PUB49). EC_5.2 cis-trans-isomerase

Gene families : OG0013362 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr3.03204
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_1

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016859	cis-trans isomerase activity	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018208	peptidyl-proline modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005839	proteasome core complex	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006508	proteolysis	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009056	catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009057	macromolecule catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016887	ATP hydrolysis activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0140535	intracellular protein-containing complex	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901575	organic substance catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:1902494	catalytic complex	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002130	Cyclophilin-type_PPIase_dom	349	499

External Links

No external refs found!