Lsat_1_v5_gn_9_921.1

Description : not classified

Gene families : OG0000907 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000907_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_921.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_130

Target	Alias	Description	ECC score	Gene Family Method	Actions
Spov3_chr2.01640	No alias	not classified	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004057	arginyl-tRNA--protein transferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004402	histone acetyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004673	protein histidine kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005515	protein binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005543	phospholipid binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006366	transcription by RNA polymerase II	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006473	protein acetylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006475	internal protein amino acid acetylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006897	endocytosis	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008080	N-acetyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008289	lipid binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009057	macromolecule catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010921	regulation of phosphatase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015693	magnesium ion transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016192	vesicle-mediated transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016567	protein ubiquitination	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016573	histone acetylation	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0016592	mediator complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016598	protein arginylation	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016746	acyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016755	aminoacyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0018393	internal peptidyl-lysine acetylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0018394	peptidyl-lysine acetylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019222	regulation of metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019899	enzyme binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019902	phosphatase binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019903	protein phosphatase binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0030118	clathrin coat	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0030125	clathrin vesicle coat	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0030132	clathrin coat of coated pit	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031323	regulation of cellular metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0032446	protein modification by small protein conjugation	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0034450	ubiquitin-ubiquitin ligase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0035091	phosphatidylinositol binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0035303	regulation of dephosphorylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0035304	regulation of protein dephosphorylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043543	protein acylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043687	post-translational protein modification	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051336	regulation of hydrolase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0080090	regulation of primary metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0098657	import into cell	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140299	small molecule sensor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140993	histone modifying activity	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	974	1103
IPR041569	AAA_lid_3	1127	1163

External Links

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Lsat_1_v5_gn_9_921.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation