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  5. Lsat_1_v5_gn_8_29520.1

Lsat_1_v5_gn_8_29520.1 (ALBA1, Atalba1, ALBA4)


Aliases : ALBA1, Atalba1, ALBA4

Description : component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent RNase P complex


Gene families : OG0018035 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_29520.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_150


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004674 protein serine/threonine kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005681 spliceosomal complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex organization IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002775 DNA/RNA-bd_Alba-like 19 83
No external refs found!