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  5. Lsat_1_v5_gn_6_113321.1

Lsat_1_v5_gn_6_113321.1 (CHMP1B, VPS46.1)


Aliases : CHMP1B, VPS46.1

Description : associated protein of ESCRT-III complex *(VPS46/CHMP1)


Gene families : OG0009151 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_113321.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_106


Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001727 lipid kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004143 ATP-dependent diacylglycerol kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004470 malic enzyme activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004730 pseudouridylate synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006414 translational elongation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015079 potassium ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016125 sterol metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016126 sterol biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016615 malate dehydrogenase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019915 lipid storage IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043015 gamma-tubulin binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051235 maintenance of location IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071805 potassium ion transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005024 Snf7_fam 13 176
No external refs found!