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  5. Bra006313

Bra006313 (AtCOBL4, IRX6, COBL4)


Aliases : AtCOBL4, IRX6, COBL4

Description : regulatory protein *(COB) of cellulose-hemicellulose network assembly


Gene families : OG0000892 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra006313
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_251


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0010215 cellulose microfibril organization IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003876 AMP deaminase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006164 purine nucleotide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006188 IMP biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009123 nucleoside monophosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009150 purine ribonucleotide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009165 nucleotide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009259 ribonucleotide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009260 ribonucleotide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019239 deaminase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019693 ribose phosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032261 purine nucleotide salvage IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032264 IMP salvage IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043094 cellular metabolic compound salvage IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043101 purine-containing compound salvage IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043173 nucleotide salvage IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046040 IMP metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046390 ribose phosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0047623 adenosine-phosphate deaminase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072522 purine-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0106380 purine ribonucleotide salvage IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001810 F-box_dom 3 40
IPR006918 COBRA_pln 459 622
No external refs found!