Lsat_1_v5_gn_4_74720.1 (ROC1)

Aliases : ROC1

Description : EC_5.2 cis-trans-isomerase. peptidyl-prolyl cis-trans isomerase *(ROC1/2/3)

Gene families : OG0015534 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_74720.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_213

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016859	cis-trans isomerase activity	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018208	peptidyl-proline modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003830	beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004568	chitinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005509	calcium ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005575	cellular_component	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005576	extracellular region	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005618	cell wall	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006022	aminoglycan metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006026	aminoglycan catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006030	chitin metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006032	chitin catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006040	amino sugar metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006073	obsolete cellular glucan metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006486	protein glycosylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006487	protein N-linked glycosylation	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008375	acetylglucosaminyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009060	aerobic respiration	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016757	glycosyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016758	hexosyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019646	aerobic electron transport chain	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0022900	electron transport chain	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0022904	respiratory electron transport chain	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030246	carbohydrate binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030247	polysaccharide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0030312	external encapsulating structure	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0033218	amide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043413	macromolecule glycosylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0045275	respiratory chain complex III	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045333	cellular respiration	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046348	amino sugar catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0048046	apoplast	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0070069	cytochrome complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0070085	glycosylation	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0098798	mitochondrial protein-containing complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0098803	respiratory chain complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0120227	acyl-CoA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:1901567	fatty acid derivative binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:1901681	sulfur compound binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:1902495	transmembrane transporter complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:1990204	oxidoreductase complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:1990351	transporter complex	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002130	Cyclophilin-type_PPIase_dom	7	169

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Lsat_1_v5_gn_4_74720.1 (ROC1)

Expression Profile

Co-expression Networks

Functional Annotation