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  5. Bra005545

Bra005545 (AGL18)


Aliases : AGL18

Description : MADS/AGL-type transcription factor


Gene families : OG0001964 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001964_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra005545
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_101


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005681 spliceosomal complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006811 monoatomic ion transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006820 monoatomic anion transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008483 transaminase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010215 cellulose microfibril organization IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016485 protein processing IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030198 extracellular matrix organization IEP Brassica rapa GO terms from Neighborhoods
CC GO:0033176 proton-transporting V-type ATPase complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043062 extracellular structure organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043085 positive regulation of catalytic activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044093 positive regulation of molecular function IEP Brassica rapa GO terms from Neighborhoods
CC GO:1904949 ATPase complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 55
No external refs found!