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  5. Lsat_1_v5_gn_2_112881.1

Lsat_1_v5_gn_2_112881.1 (APUM4, PUM4)


Aliases : APUM4, PUM4

Description : not classified


Gene families : OG0000292 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000292_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_112881.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_10


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0005984 disaccharide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0005991 trehalose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0005992 trehalose biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009311 oligosaccharide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009312 oligosaccharide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016051 carbohydrate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046351 disaccharide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 585 613
IPR001313 Pumilio_RNA-bd_rpt 715 747
IPR001313 Pumilio_RNA-bd_rpt 619 638
IPR001313 Pumilio_RNA-bd_rpt 678 712
IPR001313 Pumilio_RNA-bd_rpt 796 825
IPR001313 Pumilio_RNA-bd_rpt 547 580
IPR001313 Pumilio_RNA-bd_rpt 752 784
IPR001313 Pumilio_RNA-bd_rpt 649 672
IPR012940 NABP 509 542
IPR012940 NABP 339 474
No external refs found!