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Description : regulatory protein *(RGG) of mRNA quality control
Gene families : OG0006816 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra022114 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_249 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0000166 | nucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003674 | molecular_function | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003746 | translation elongation factor activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003747 | translation release factor activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003824 | catalytic activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004107 | chorismate synthase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004146 | dihydrofolate reductase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004386 | helicase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004455 | ketol-acid reductoisomerase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005524 | ATP binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005525 | GTP binding | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005737 | cytoplasm | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006082 | organic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006414 | translational elongation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006415 | translational termination | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006457 | protein folding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006520 | amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006534 | cysteine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006535 | cysteine biosynthetic process from serine | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006563 | L-serine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006605 | protein targeting | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006612 | protein targeting to membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006813 | potassium ion transport | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008079 | translation termination factor activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008270 | zinc ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008312 | 7S RNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008374 | O-acyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0009001 | serine O-acetyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009058 | biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009072 | aromatic amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016407 | acetyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016412 | serine O-acyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016413 | O-acetyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016746 | acyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016829 | lyase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016874 | ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0017076 | purine nucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019344 | cysteine biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0022411 | cellular component disassembly | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0032553 | ribonucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0036094 | small molecule binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0043167 | ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0043168 | anion binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043933 | protein-containing complex organization | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0044183 | protein folding chaperone | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044281 | small molecule metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0045047 | protein targeting to ER | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0045182 | translation regulator activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046653 | tetrahydrofolate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046654 | tetrahydrofolate biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0048500 | signal recognition particle | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0051082 | unfolded protein binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051668 | localization within membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0072657 | protein localization to membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140657 | ATP-dependent activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| No external refs found! |