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  5. Bra017728

Bra017728 (CHI, AtCHI, A11, TT5, CFI)


Aliases : CHI, AtCHI, A11, TT5, CFI

Description : EC_5.5 intramolecular lyase. chalcone isomerase


Gene families : OG0002138 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002138_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra017728
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_103


Type GO Term Name Evidence Source
MF GO:0016872 intramolecular lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005199 structural constituent of cell wall IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009664 plant-type cell wall organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030695 GTPase regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048364 root development IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048367 shoot system development IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048731 system development IEP Brassica rapa GO terms from Neighborhoods
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140110 transcription regulator activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR016087 Chalcone_isomerase 18 195
No external refs found!