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  5. Mp4g16380.1

Mp4g16380.1 (EMB2733, GSM1, ESP3, RSW12)


Aliases : EMB2733, GSM1, ESP3, RSW12

Description : RNA helicase *(Prp2)


Gene families : OG0002400 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002400_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp4g16380.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_12


Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003682 chromatin binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004402 histone acetyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005488 binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006401 RNA catabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006402 mRNA catabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006473 protein acetylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006475 internal protein amino acid acetylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006914 autophagy IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0007165 signal transduction IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0008287 protein serine/threonine phosphatase complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009890 negative regulation of biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009892 negative regulation of metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016570 histone modification IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016573 histone acetylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0018205 peptidyl-lysine modification IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0018393 internal peptidyl-lysine acetylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0018394 peptidyl-lysine acetylation IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0019208 phosphatase regulator activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0019888 protein phosphatase regulator activity IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0031011 Ino80 complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0031323 regulation of cellular metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0031324 negative regulation of cellular metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0034212 peptide N-acetyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043543 protein acylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0044877 protein-containing complex binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0050789 regulation of biological process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0061919 process utilizing autophagic mechanism IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0065007 biological regulation IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0070603 SWI/SNF superfamily-type complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0097346 INO80-type complex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140110 transcription regulator activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140993 histone modifying activity IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1903293 phosphatase complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1904949 ATPase complex IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001650 Helicase_C 610 735
IPR011709 DEAD-box_helicase_OB_fold 946 1023
IPR007502 Helicase-assoc_dom 798 886
No external refs found!