Spov3_chr4.04186 (emb1220, PRP31)


Aliases : emb1220, PRP31

Description : component *(PRPF31) of spliceosomal U4/U6 snRNP


Gene families : OG0073858 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.04186
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_1


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003674 molecular_function IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003684 damaged DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003743 translation initiation factor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003924 GTPase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006099 tricarboxylic acid cycle IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006289 nucleotide-excision repair IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006810 transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006811 monoatomic ion transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009141 nucleoside triphosphate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009150 purine ribonucleotide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009259 ribonucleotide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010498 proteasomal protein catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0016020 membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016746 acyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0017003 protein-heme linkage IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0017004 cytochrome complex assembly IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0017006 protein-tetrapyrrole linkage IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019693 ribose phosphate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0020037 heme binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0030118 clathrin coat IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0030125 clathrin vesicle coat IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0030127 COPII vesicle coat IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0030132 clathrin coat of coated pit IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0030163 protein catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046034 ATP metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046906 tetrapyrrole binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048193 Golgi vesicle transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051179 localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0098797 plasma membrane protein complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901565 organonitrogen compound catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1902600 proton transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002687 Nop_dom 104 332
IPR019175 Prp31_C 341 457
No external refs found!