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Bra010234 (beta1-COP)


Aliases : beta1-COP

Description : subunit beta of cargo adaptor F-subcomplex


Gene families : OG0003241 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003241_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra010234
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_86


Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
CC GO:0030126 COPI vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005096 GTPase activator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006479 protein methylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008047 enzyme activator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008213 protein alkylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016570 histone modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016571 histone methylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016579 protein deubiquitination IEP Brassica rapa GO terms from Neighborhoods
CC GO:0017119 Golgi transport complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0018022 peptidyl-lysine methylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0018024 obsolete histone lysine N-methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0018193 peptidyl-amino acid modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0018205 peptidyl-lysine modification IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019783 ubiquitin-like protein peptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030695 GTPase regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032259 methylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034968 histone lysine methylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043414 macromolecule methylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048193 Golgi vesicle transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070646 protein modification by small protein removal IEP Brassica rapa GO terms from Neighborhoods
CC GO:0099023 vesicle tethering complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140677 molecular function activator activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011710 Coatomer_bsu_C 669 807
IPR002553 Clathrin/coatomer_adapt-like_N 19 476
IPR029446 COPB1_appendage_platform_dom 813 940
No external refs found!