Sequence Description Alias PCC hrr Bra022091 Nonsense-Mediated mRNA Decay effector protein *(UPF1) UPF1, LBA1, ATUPF1 0.9245162893087774 2 Bra020039 Nonsense-Mediated mRNA Decay protein *(SMG7) SMG7 0.9235632157775363 11 Bra038910 miRNA cytidylyltransferase *(NTP2/6/7/8) NTP6 0.9234009593544055 3 Bra023387 RNA helicase *(Prp16) PINP1, CUV, PRP16, EMB3011, FEY 0.9232584520368917 4 Bra002233 Nonsense-Mediated mRNA Decay protein *(SMG7) SMG7 0.9225317435065127 8 Bra013971 SMARCK component *(BRIP) of SWI/SNF chromatin remodeling complex BRIP2 0.9192307668322067 6 Bra037151 C2H2 subclass IDD transcription factor ENY, IDD1 0.9185347615581939 7 Bra015687 component *(SKIP/MAC6) of MAC spliceosome-associated complex SKIP 0.9181938527605448 12 Bra005691 EC_2.7 transferase transferring phosphorus-containing group. mRNA capping enzyme 0.9158190860051545 9 Bra040419 component *(NPL4) of NPL4-UFD1 heterodimer NPL41 0.9151888560763172 15 Bra019137 not classified APUM6, PUM6 0.9134559195677463 14 Bra006995 not classified 0.9073017062190848 12 Bra034172 component *(SF3B3) of splicing factor 3B complex SAP130b, AtSAP130b 0.9062062384861933 13 Bra018857 not classified 0.9059178512505447 32 Bra018821 DNA polymerase kappa *(POLK) 0.9056026590899934 61 Bra034079 effector receptor *(NLR) 0.9045593393618951 28 Bra029059 not classified 0.9036975375446726 17 Bra009045 catalytic component *(CDKC-1/CTK1) of polymerase-II kinase complex. EC_2.7 transferase transferring phosphorus-containing group. CDKC protein kinase. catalytic component *(CDKC) of cyclin-dependent kinase complex CDKC;1 0.9032232384926333 18 Bra033534 nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha) IMPA-2 0.9028025037973619 19 Bra003091 TOR-dependent regulatory protein *(TAP46) of protein phosphatase complex TAP46 0.9010879203237904 20 Bra031651 component *(NF-YC) of NF-Y transcription factor complex NF-YC9, HAP5C 0.8994951644711563 22 Bra038036 component *(TRM7) of TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex. MRM2-type rRNA methyltransferase AtTRM7a, SCS9, TRM7a 0.8985610256799652 22 Bra002917 DNA topoisomerase *(TOP1) TOP1BETA, TOP1 0.8979026245113583 23 Bra000641 component *(SPT5) of SPT4/5 transcription elongation factor complex GTA2, SPT5-2, GTA02 0.8974189193429223 24 Bra037923 not classified CID12, ATRBP37, RBP37 0.8971059930918701 25 Bra013150 ubiquitin-proteasome shuttle factor *(NUB1) NUB1 0.8970269255219891 44 Bra024789 not classified 0.8962082830621451 27 Bra019819 nuclear lamina lamin-like protein *(CRWN) CRWN2, LINC2 0.8958172868583619 28 Bra003438 component *(CSN1) of COP9 signalosome complex FUS6, ATFUS6, EMB78, ATSK31, AtCSN1, COP11, CSN1, SK31 0.8956490084571399 29 Bra004751 component *(RPP29/POP4) of RNA-dependent RNase P complex POP4 0.8949576844812823 30 Bra029068 regulatory component *(HIZ2) of adenosine N6-methyltransferase complex 0.894750959733871 31 Bra000719 component *(SPT16) of FACT histone chaperone complex SPT16 0.8931905905207458 32 Bra004523 RNA splicing factor *(RS31/40/41) RS31a, At-RS31a 0.8931697117551378 55 Bra019938 nucleoporin of nuclear pore complex *(NUP98) Nup98a, DRA2 0.8929763175123933 57 Bra027743 not classified eIFiso4G1 0.8929674185042658 50 Bra029509 autophagosome ubiquitin-fold protein *(ATG8) ATG8B 0.8927219388522445 66 Bra039965 not classified PUM1, APUM1 0.8923697842149023 71 Bra012035 not classified 0.8913845982428743 38 Bra030366 not classified 0.8891533552899766 39 Bra037197 RLCK-IV receptor-like protein kinase. EC_2.7 transferase transferring phosphorus-containing group CRCK3 0.8890123692476198 40 Bra002632 regulatory factor *(TZF) of mRNA stress granule formation TZF9 0.8884652908338322 75 Bra028208 not classified 0.8882199482247567 42 Bra004123 ubiquitin carboxyl-terminal hydrolase *(UCH1/2). EC_3.4 hydrolase acting on peptide bond (peptidase). ubiquitin carboxyl-terminal hydrolase *(UCH1/2) UCH2 0.8878553305773739 43 Bra018378 EC_4.2 carbon-oxygen lyase. enolase ENOC, ENO3 0.8877408879713125 44 Bra028184 ubiquitin-proteasome shuttle factor *(RAD23) RAD23D 0.8869849831401645 45 Bra022897 cyclin-dependent kinase inhibitor *(KRP/ICK) ICK7, KRP4, ACK2 0.8867341557807819 46 Bra005804 regulatory factor *(AIF1) of anther dehiscence. NAC-type transcription factor NAC2, anac078, NAC78, NTL11 0.8865455648583075 47 Bra010410 assembly factor (eIF1) of eIF1 0.8863248792788155 48 Bra008834 not classified 0.8861131462203369 49 Bra027380 not classified 0.8854369705368466 54 Bra027456 EC_3.4 hydrolase acting on peptide bond (peptidase). alpha-type-6 component *(PAF) of 26S proteasome ARS5, PAF1, ATPSM30 0.8839605317822306 51 Bra015959 component *(ESP1) of Cleavage Stimulatory Factor (CstF) complex ESP1 0.8827336771277764 53 Bra018847 chromatin remodeling factor *(Ris1) FRG2, CHR28 0.8825532672176173 54 Bra020404 component *(INB2) of INO80 chromatin remodeling complex INB2B 0.8824327778454804 55 Bra003464 miRNA cytidylyltransferase *(NTP2/6/7/8) NTP8 0.881993246230748 56 Bra008819 not classified 0.8817618460287767 57 Bra040445 not classified GAAP2, BIL4, AtLFG2, LFG2 0.8816947812466852 58 Bra016302 not classified 0.8813406213917626 59 Bra027631 EC_5.1 racemase or epimerase. ribulose-phosphate 3-epimerase 0.8806826903341055 60 Bra006608 co-chaperone *(Hsp40) ATJ2, J2 0.8801543167872912 61 Bra039124 not classified 0.8789841782863 81 Bra009704 component *(NRPC16/RPC34) of TFIIIe transcription factor module 0.8787836901486124 65 Bra019346 magnesium dechelatase *(SGR) ATNYE1, NYE1, SGR, SGR1 0.8787349872815802 75 Bra029530 component *(MED16) of tail module of MEDIATOR transcription co-activator complex IEN1, AtSFR6, YID1, MED16, GLH2, SFR6 0.878540532304335 89 Bra039959 not classified 0.8785275470595125 68 Bra000600 component *(RQC2) of Ribosome-associated Quality Control (RQC) complex emb1441 0.8784961194240842 69 Bra029520 component *(DFM1) of ER-associated protein degradation (ERAD) machinery DER2.2 0.8781302015417833 70 Bra018630 regulatory component *(DCP1) of mRNA decapping complex DCP1, ATDCP1 0.8780249649484743 71 Bra015799 regulatory component *(RPN3) of 26S proteasome 0.8774052742201349 72 Bra002481 E3 SUMO ubiquitin ligase *(SIZ1) SIZ1, ATSIZ1 0.877059252301705 73 Bra015218 component *(NRPE3) of RNA polymerase V complex. component *(NRPB3) of RNA polymerase II complex. component *(NRPD3) of RNA polymerase IV complex NRPB3, RPB35.5A, NRPD3, NRPE3A, RBP36A 0.8770174250832942 74 Bra028333 catalytic component *(CDKC) of cyclin-dependent kinase complex. catalytic component *(CDKC-1/CTK1) of polymerase-II kinase complex. CDKC protein kinase. EC_2.7 transferase transferring phosphorus-containing group CDKC2, CDKC;2 0.8763555272491742 75 Bra013562 RNA polymerase-II nuclear import factor *(GPN1) QQT2, GPN1 0.8762511714997008 76 Bra037896 EC_2.1 transferase transferring one-carbon group. component *(MTB) of adenosine N6-methyltransferase complex EMB1691, MTB 0.8756017274060884 77 Bra036327 NAC-type transcription factor NTM2, ANAC069, NAC069, NTL13 0.8745376008314755 80 Bra037286 assembly factor (TRN1) of RNA-induced silencing complex (RISC) assembly. nucleocytoplasmic import karyopherin *(IMB2) ATTRN1, TRN1, IMB2 0.8740137253506279 81 Bra017910 ubiquitin adaptor protein *(TOL) TOL3 0.8738561708263324 82 Bra006645 component *(VPS24) of ESCRT-III complex VPS24.1 0.8737638061120125 83 Bra003360 assembly factor (SAD2/EMA) of RNA-induced silencing complex (RISC) assembly 0.8731258022298252 84 Bra032210 E2 ubiquitin-conjugating enzyme *(UBC15) UBC15, ATUBC2-1 0.8729648483909443 85 Bra006698 component *(NOT2) of mRNA deadenylation CCR4-NOT complex AtVIP2, VIP2, NOT2b 0.8716336248664726 86 Bra025529 transcription termination factor *(TTF1) 0.8710265957133578 88 Bra011596 brassinosteroid signalling protein kinase *(BSK). EC_2.7 transferase transferring phosphorus-containing group. RLCK-XII receptor-like protein kinase. protein kinase *(BSK1) BSK1 0.8705072924947715 89 Bra022779 E1 ubiquitin-activating enzyme MOS5, ATUBA1, UBA1 0.8699903324860385 90 Bra013325 not classified 0.8699751901104522 91 Bra022201 E3 ubiquitin ligase *(UPL6) UPL6 0.8698428102240251 93 Bra028531 scaffold component *(NOT1) of mRNA deadenylation CCR4-NOT complex NOT1 0.869617286847361 94 Bra026041 molybdopterin sulfurase *(ABA3). xanthoxin oxidase molybdopterin sulfurase *(ABA3) LOS5, SIR3, ACI2, ABA3, ATABA3, AtLOS5, GIN5 0.8692309306377075 95 Bra028007 not classified 0.8690671449090198 96 Bra012034 component *(SERRATE) of DCL1-HYL1 miRNA biogenesis complex SE, SERRATE 0.8685874670664002 97 Bra015368 component *(TAF6) of SAGA transcription co-activator complex ATTAF6, TAF6, EMB2781, TAFII59 0.8684455512614734 99 Bra012038 MYB class-R2R3 subgroup-18 transcription factor. component *(CSN2) of COP9 signalosome complex COP12, ATCSN2, FUS12, CSN2 0.8684339151117795 100