Sequence Description Alias PCC hrr Bra029530 component *(MED16) of tail module of MEDIATOR transcription co-activator complex IEN1, AtSFR6, YID1, MED16, GLH2, SFR6 0.929125489229988 3 Bra016961 deubiquitinase *(UBP5/8-11) ATUBP5, PDE323, UBP5 0.9230486250840113 2 Bra019137 not classified APUM6, PUM6 0.921362492385544 8 Bra005812 not classified EPCR2 0.9170178657594514 4 Bra003464 miRNA cytidylyltransferase *(NTP2/6/7/8) NTP8 0.9137254789768213 5 Bra019432 component *(HIRA) of HIRA chaperone complex HIRA 0.9131676494715746 6 Bra000719 component *(SPT16) of FACT histone chaperone complex SPT16 0.9102829275367289 8 Bra001797 deubiquitinase component *(GID6/UBP14) of GID ubiquitination complex TARANI, TTN6, PER1, DA3, ATUBP14, TNI, UBP14 0.9075806113849302 8 Bra014161 component *(SRP54) of SRP (signal recognition particle) complex 0.9061215870941494 9 Bra029068 regulatory component *(HIZ2) of adenosine N6-methyltransferase complex 0.9030490277422202 10 Bra037299 protein factor (NERD) of non-canonical RdDM pathway NERD 0.8983764596820214 15 Bra019223 NADPH:cytochrome P450 reductase *(ATR). EC_1.6 oxidoreductase acting on NADH or NADPH ATR1, AR1, AtCPR1 0.8959723221210714 60 Bra030524 component *(XPD) of multifunctional TFIIh complex. meiotic crossover accessory protein *(BVF1). component *(XPD) of TFIIh basal transcription factor complex UVH6, ATXPD 0.8957661864791638 13 Bra000196 component *(BTE1) of DREAM cell cycle regulatory complex 0.8951712163194897 14 Bra038128 EC_2.7 transferase transferring phosphorus-containing group. MAP-kinase protein kinase MPK18, ATMPK18 0.8950724314973221 15 Bra000641 component *(SPT5) of SPT4/5 transcription elongation factor complex GTA2, SPT5-2, GTA02 0.8946988164845854 29 Bra019452 auxiliary component *(NAA35) of NatC N-terminal acetylase complex MAK10, ATMAK10 0.8946500200855679 17 Bra040434 regulatory GTPase (MIRO) of mitochondrion fission ATCBG, MIRO2 0.8933759652928093 18 Bra033534 nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha) IMPA-2 0.8919158022528858 19 Bra015006 EC_1.8 oxidoreductase acting on sulfur group of donor. glutathione reductase *(GR) ATGR1, GR1 0.8913314299646518 20 Bra028956 not classified TREPH1 0.8912759464942712 73 Bra028790 NAC-type transcription factor NAC2, anac078, NAC78, NTL11 0.8909237429467276 22 Bra022873 component *(RAD50) of DNA resection MRE11-RAD50-NBS1 (MRN) complex. component *(RAD50) of MRE11-RAD50-NBS1 (MRN) complex ATRAD50, RAD50 0.8898774367104126 23 Bra003360 assembly factor (SAD2/EMA) of RNA-induced silencing complex (RISC) assembly 0.8897330083950521 24 Bra012753 component *(PRL1/MAC2) of MAC spliceosome-associated complex PRL1 0.888872188142169 25 Bra020249 E3 SUMO ubiquitin ligase *(SIZ1) SIZ1, ATSIZ1 0.8888113314008439 51 Bra034692 scaffold component *(VCS) of mRNA decapping complex VCS 0.8886635636301453 68 Bra021701 protein factor *(PRPF8/SUS2) of MAC spliceosome-associated complex SUS2, EMB177, EMB33, PRP8, EMB14 0.8879905306940304 28 Bra022762 auxiliary factor of DNA methylation pathway *(MORC) AtMORC4, MORC4 0.8879103897140753 29 Bra018407 component *(SRm160) of RNA quality control Exon Junction complex 0.8874711964781697 30 Bra039057 component *(NRP-ABCDE6) of RNA polymerase complexes NRPD6A, NRPE6A, NRPB6A 0.8874487885083505 31 Bra041007 pre-mRNA-processing protein *(PRP40A/B) ATPRP40A, PRP40A 0.8871112460506879 32 Bra017181 not classified 0.8866530795006621 33 Bra030884 regulatory RNA helicase *(RH20/RH30) of virus replication AtRH20, RH20 0.8866360619492724 34 Bra013562 RNA polymerase-II nuclear import factor *(GPN1) QQT2, GPN1 0.8864420482526836 35 Bra028208 not classified 0.8847806911138404 39 Bra017422 ATPase component *(Etl1) CHA19, CHR19, ETL1 0.8829006331108911 38 Bra001999 component *(SYF2) of MAC spliceosome-associated complex AtSYF2 0.8809511264297439 39 Bra035888 bHLH-type transcription factor. regulatory protein (CIB) of blue light perception. nucleocytoplasmic transport karyopherin *(MOS14) MOS14 0.88067544285693 40 Bra030688 GRAS-type transcription factor ATGRAS2, GRAS2, SCL14 0.8805068150532025 41 Bra015485 transcriptional co-activator *(BET/GTE) GTE4 0.8791461866551233 42 Bra036074 not classified 0.8791359218935387 76 Bra025043 not classified 0.8790232396122428 44 Bra012956 component *(SMC6) of homologous recombination repair Smc5-Smc6 complex MIM, ATRAD18, SMC6B 0.877991415539671 45 Bra034457 component *(UPF3) of RNA quality control Exon Junction complex UPF3, ATUPF3 0.8779074828346651 46 Bra026488 P5-type cation-transporting ATPase *(MIA). regulatory protein *(DYAD/SWI1) of meiotic recombination MIA, PDR2 0.8778871825500005 47 Bra010869 component *(RINGLET/RLT) of ISWI chromatin remodeling complex RLT1, HB-1 0.8774311018001928 66 Bra025529 transcription termination factor *(TTF1) 0.8753188839624926 50 Bra005691 EC_2.7 transferase transferring phosphorus-containing group. mRNA capping enzyme 0.8739281493984722 59 Bra002879 component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im) complex 0.8738884700266986 52 Bra013545 component *(SF3B2) of splicing factor 3B complex 0.8728586122275444 53 Bra040649 MYB-RELATED transcription factor *(ALY). component *(ALY) of DREAM cell cycle regulatory complex ALY2, ATALY2 0.8702445975503328 55 Bra022473 dodecenoyl-CoA isomerase ECHIC, ECI1, PEC11, ATECI1 0.8700270797009682 56 Bra012260 RNA helicase *(Brr2) BRR2a, emb1507, BRR2 0.869331908186587 57 Bra001212 regulatory component *(PP4R3) of PP4 phosphatase complex. regulatory component *(PP4R3) of PP4 phosphatase complex SMEK1, PP4R3, PSY2L 0.8691902150188321 95 Bra032431 transcriptional co-activator *(BET/GTE) GTE4 0.8688332035749187 59 Bra010999 manganese/calcium cation transporter *(BICAT) PML4 0.8687417769012358 60 Bra027631 EC_5.1 racemase or epimerase. ribulose-phosphate 3-epimerase 0.8681068574665329 61 Bra013739 not classified 0.8678119987496815 62 Bra040447 peptidyl-prolyl cis-trans isomerase *(CYP63/CYP95). EC_5.2 cis-trans-isomerase 0.867410753605297 80 Bra034288 not classified 0.866706934674027 64 Bra012053 scaffold nucleoporin of nuclear pore complex *(NUP205) EMB3142, EDS4 0.8667037430252288 65 Bra022501 cold sensor *(COLD1). plasma membrane-localized abscisic acid receptor *(GTG) GTG1 0.8658054718716264 66 Bra013250 regulatory protein *(COV1) of vacuolar protein sorting COV1 0.8657498493072989 67 Bra023416 component *(Pfs2/FY) of Cleavage and Polyadenylation Specificity Factor (CPSF) complex. cleavage and polyadenylation specificity factor *(FY) FY, WDR33 0.86559561220268 68 Bra020317 regulatory protein *(MPP6) of Exosome complex 0.8655619278716934 69 Bra036615 component *(LSm4) of U6-associated LSm accessory ribonucleoprotein complex LSM4, emb1644 0.8654751199571191 83 Bra036568 methylation reader Alfin of PRC1 complex AL4 0.8654331761548862 71 Bra012760 not classified 0.8650670724644801 72 Bra029622 component *(Sec24) of Sec23/24 cargo adaptor subcomplex SEC24A, ERMO2, AtSEC24A 0.8649197956652881 73 Bra005994 associated component *(HDC1) of histone deacetylase machineries HDC1, RXT3-like 0.8642202720238645 74 Bra023935 not classified 0.8633971464350114 76 Bra034172 component *(SF3B3) of splicing factor 3B complex SAP130b, AtSAP130b 0.8633955710609851 99 Bra020738 protein de-S-acylation enzyme *(ABAPT) 0.8629674286579193 78 Bra019885 cohesin cofactor *(WAPL) WAPL1, AtWAPL1 0.8626470738530684 80 Bra037286 assembly factor (TRN1) of RNA-induced silencing complex (RISC) assembly. nucleocytoplasmic import karyopherin *(IMB2) ATTRN1, TRN1, IMB2 0.862500330996421 94 Bra025044 not classified MUSE7 0.8614762291177948 83 Bra032664 scaffold component *(NOT1) of mRNA deadenylation CCR4-NOT complex NOT1 0.8608257716801794 86 Bra023043 not classified 0.8605511976325382 87 Bra015828 exoribonuclease *(RAT1/XRN2) AtXRN3, XRN3 0.8600080015737621 90 Bra034860 methylation reader Alfin of PRC1 complex AL2 0.8591956212921857 93 Bra036686 not classified RIN13 0.8590859586896382 94 Bra004464 not classified 0.857777604701504 96 Bra013792 not classified 0.8566159025320083 98 Bra035105 nucleoporin of nuclear pore complex *(NUA) AtTPR, NUA 0.856324404856647 99 Bra008314 not classified 0.8560234310252927 100