Sequence Description Alias PCC hrr Bra020935 cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14). autophagosome ubiquitin-fold protein *(ATG8) PTAC14, TAC14 0.8348784712562752 2 Bra025336 RsmD-type rRNA methyltransferase RsmD 0.805097585627406 20 Bra025013 endoribonuclease *(SOT1) SOT1 0.795410764420765 18 Bra008602 EC_6.1 ligase forming carbon-oxygen bond. valine-tRNA ligase EMB2247 0.7924388474711926 13 Bra039811 not classified MEE40 0.7747212652130137 27 Bra034781 not classified EngA-1, DER, emb2738 0.7735401830546922 39 Bra007044 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1) FLN1 0.7638165455985854 58 Bra035782 starch branching enzyme. EC_2.4 glycosyltransferase EMB2729, BE1 0.7636644244692817 16 Bra027655 cofactor of plastid-encoded RNA polymerase *(PAP11/MURE). catalytic protein *(MurE) of UDP-N-acetylmuramic acid pentapeptide formation PDE316, ATMURE, MURE, APG13 0.7602913110864356 94 Bra016088 EC_2.7 transferase transferring phosphorus-containing group. multisubstrate deoxyribonucleoside kinase *(TK2) AtdNK, dNK 0.7518150906405857 93 Bra022344 plastidial UMP kinase *(PUMPKIN) PUMPKIN 0.7517341110870186 59 Bra011486 not classified DJ-1c, AtDJ1C, DJ1C 0.7380987603397827 14 Bra010359 regulatory factor *(NCP/RCB) of plastid-encoded RNA polymerase activity PDE333, ECB1, MRL7, SVR4, AtECB1, RCB 0.7362015290108691 24 Bra022830 plastidial DNA:RNA hybrid helicase *(RHON1) 0.735439857809519 27 Bra025142 chaperone *(Hsp90) CR88, EMB1956, AtHsp90.5, HSP90C, AtHsp90C, Hsp88.1, HSP90.5 0.7338018830968429 43 Bra018736 RNA editing factor *(OZ) 0.727339533839725 32 Bra039376 RsmB-type rRNA methyltransferase AtTRM4e, TRM4e 0.7255932267315752 49 Bra003962 plastidial RNA splicing factor *(HPE1) HPE1, RBD1 0.716849256149485 62 Bra019926 not classified emb2004 0.7130192444397129 33 Bra015889 cofactor of plastid-encoded RNA polymerase *(PAP2/TAC2) PDE343, PTAC2 0.7034577326014845 33 Bra040142 cofactor of plastid-encoded RNA polymerase *(PAP1/TAC3) PTAC3, PDE324 0.7014436964530407 70 Bra007498 not classified 0.6970480493733702 31 Bra002880 chromatin architectural modulator *(DEK) 0.6946078739198449 33 Bra020479 clade F phosphatase 0.692376320863731 41 Bra011519 component *(SWIB) of SWI-B chromatin-remodeling complexes SWIB3 0.6908671188888529 68 Bra003472 not classified emb1703 0.6847397652276509 53 Bra024312 component *(FtsHi) of protein translocation ATPase motor complex FtsHi4, EMB3144 0.6821161254952304 40 Bra000529 component *(CSN2) of COP9 signalosome complex COP12, ATCSN2, FUS12, CSN2 0.6799791813121886 42 Bra022626 RNA editing co-factor *(WTG1) WTG1 0.6785536843896411 44 Bra031244 RNA editing factor *(ORRM1) ORRM1 0.6766673584038809 45 Bra003604 component *(FtsH12) of protein translocation ATPase motor complex EMB1047, FTSH12, EMB36, EMB156 0.6753795682258747 51 Bra016240 group-II intron splicing RNA helicase *(ISE2) ISE2, EMB25, PDE317, 115J-4A 0.6732838478202732 50 Bra029899 cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10) PTAC10, TAC10, PDE312 0.6731732146584117 51 Bra009644 translation elongation factor *(EF-P) 0.6646775826385685 60 Bra001374 subunit A of DNA gyrase complex GYRA 0.6639772347509749 76 Bra038629 exoribonuclease *(RNase J) emb2746, RNJ, AtRNJ 0.6568588141038678 79 Bra009342 component *(Pex1) of Pex1-Pex6 subcomplex PEX1, EMB2817 0.6533875189932428 77 Bra027179 endoribonuclease *(RNase Z). EC_3.1 hydrolase acting on ester bond TRZ4 0.6524039037868844 79 Bra036169 FSD2-interacting component of plastid-encoded RNA polymerase PRDA1 0.6493332934160366 81 Bra021228 not classified RFC3 0.6491824193949672 82 Bra004937 component *(cpFtsY) of thylakoid membrane SRP insertion system CPFTSY, FRD4 0.6430535174835157 86 Bra032408 plastidial mRNA processing factor *(SOT5) EMB88, EMB2279, SOT5 0.6397532047449924 92 Bra022871 class XI myosin microfilament-based motor protein. 16S-rRNA maturation factor *(RAP) ATXIF, XIF, ATMYO5 0.6383897642034158 93 Bra001507 subunit beta of CPN60 assembly chaperone heterodimer. subunit beta of Cpn60 chaperonin complex. chaperone *(Hsp60) CPNB2, Cpn60beta2 0.6359153698512244 97