Sequence Description Alias PCC hrr Bra018617 basal Sigma-type transcription factor SIGA, SIGB, ATSIG1, ATSIG2, SIG1, SIG2, ABC1 0.8997860576728407 2 Bra014755 protein involved in PS-II repair *(PPL1) PPL1 0.8723204104144541 3 Bra014681 not classified PPD6 0.8716758325882656 11 Bra015668 plastidial ascorbate peroxidase *(APX). EC_1.11 oxidoreductase acting on peroxide as acceptor TAPX 0.869134030926733 4 Bra010483 plastidial ribonucleoprotein *(CP31) ATRBP33, ATRBP31, CP31A, RBP31, CP33a, CP31 0.865066418351599 11 Bra040427 translation ribosome recycling factor *(RRF) cpRRF, HFP108, AtcpRRF, RRF 0.8609932539076892 22 Bra013527 assembly factor CRR9 involved in NDH complex assembly CRR9 0.8493905294877014 7 Bra033412 protein involved in PS-II assembly *(Psb27) PSB27 0.847897104100269 12 Bra007282 component *(cL37) of large plastid ribosomal-subunit proteome PSRP5 0.8466713885668403 26 Bra039091 component *(bS21c) of small plastid ribosomal-subunit proteome GHS1, LPE2, RPS21 0.843902934769559 21 Bra039227 component *(bL35c) of large plastid ribosomal-subunit proteome PRPL35 0.8417722286359833 15 Bra039115 peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38). EC_5.2 cis-trans-isomerase. protein involved in PS-II assembly *(CYP38) CYP38, ATCYP38 0.8415520875468004 13 Bra015397 component *(uL6c) of large plastid ribosomal-subunit proteome RPL6, EMB2394 0.8415435617211774 31 Bra033438 plastidial ribonucleoprotein *(CP33a) PDE322, CP33 0.8413575981689368 18 Bra027273 component *(bS20c) of small plastid ribosomal-subunit proteome PRPS20 0.8404311616780166 46 Bra021879 component *(uS5c) of small plastid ribosomal-subunit proteome SCA1, RPS5, EMB3113, PRPS5 0.8378921851382136 30 Bra029188 assembly factor involved in RuBisCo assembly *(RAF2) ATP1, SDIRIP1, RAF2 0.8376706108199715 23 Bra039542 protein involved in PS-I assembly *(PPD1) PPD1 0.8372027829998613 18 Bra023302 component *(uL11c) of large plastid ribosomal-subunit proteome PRPL11 0.8338775597699845 27 Bra011081 EC_6.1 ligase forming carbon-oxygen bond. translation elongation factor *(EF-Ts). aspartate-tRNA ligase 0.8327034290540946 30 Bra013517 component *(PsbQ) of PS-II oxygen-evolving center PSBQ-1, PSBQA, PSBQ 0.8322781652228782 21 Bra007655 EC_5.2 cis-trans-isomerase. peptidyl-prolyl cis-trans isomerase ROC4, CYP20-3 0.8258765403789934 24 Bra006622 not classified 0.8243552521233891 23 Bra001223 not classified 0.8227499614593183 24 Bra013018 protein involved in PS-II assembly *(HCF136) HCF136 0.8196330744906954 25 Bra040448 component *(uL1c) of large plastid ribosomal-subunit proteome EMB3126, PRPL1 0.8192168916432411 28 Bra027235 peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) 0.8185874247299403 27 Bra000791 leucine-tRNA ligase EMB2369 0.818386319093202 28 Bra001415 EC_1.11 oxidoreductase acting on peroxide as acceptor. typical 2-Cys peroxiredoxin *(2-CysPrx) 2CPA 0.8157279469497686 29 Bra007055 component *(bL17c) of large plastid ribosomal-subunit proteome PRPL17 0.8154372817021074 71 Bra016977 dihydroxyacetone phosphate reductase *(SFD1). EC_1.1 oxidoreductase acting on CH-OH group of donor GLY1, SFD1 0.813999121713502 31 Bra037439 isoleucine-tRNA ligase. EC_6.1 ligase forming carbon-oxygen bond OVA2 0.8135878313003009 32 Bra037609 component *(bL9c) of large plastid ribosomal-subunit proteome RPL9 0.8129439303808902 55 Bra016989 EC_4.1 carbon-carbon lyase. uroporphyrinogen III decarboxylase *(HEME) HEME2 0.8096029338785603 34 Bra003776 component *(uS9c) of small plastid ribosomal-subunit proteome TWN3, SOT8, RPS9, PRPS9 0.8075044922508674 35 Bra036365 EC_1.11 oxidoreductase acting on peroxide as acceptor. atypical 2-Cys peroxiredoxin *(PrxQ) ATPRX Q, PRXQ 0.8062941439858868 36 Bra002973 component *(uL24c) of large plastid ribosomal-subunit proteome RPL24, SVR8 0.8047328783000413 37 Bra027754 manganese/calcium cation transporter *(BICAT) BICAT1, PAM71, CCHA1 0.8045272455905519 38 Bra038389 not classified CP33C 0.8042273701142506 39 Bra015850 component *(bL31c) of large plastid ribosomal-subunit proteome emb2184 0.8011937955025874 40 Bra008961 not classified PPD5 0.8002653902359298 41 Bra021042 component *(bL19c) of large plastid ribosomal-subunit proteome 0.8000508394581036 46 Bra008373 component *(uL13c) of large plastid ribosomal-subunit proteome emb1473 0.797510550547773 48 Bra034277 organellar tryptophan-tRNA ligase OVA4 0.7967463988527026 44 Bra016017 not classified 0.794857372519905 45 Bra015574 component *(uL4c) of large plastid ribosomal-subunit proteome RPL4, PRPL4, EMB2784 0.7942268495659539 86 Bra032984 component *(bS21c) of small plastid ribosomal-subunit proteome GHS1, LPE2, RPS21 0.7913924481014728 59 Bra035563 nascent polypeptide chaperone *(TIG) HP65b, TIG1 0.7913277145362028 81 Bra033287 not classified 0.7911215464765652 49 Bra003176 component *(bL17c) of large plastid ribosomal-subunit proteome PRPL17 0.7894440029946719 50 Bra030537 protein involved in PS-II assembly *(Psb27) PSB27 0.7890655936287739 51 Bra015826 protein involved in PS-II assembly *(LQY1). protein disulfide isomerase *(LQY1) LQY1 0.7881842374964768 52 Bra035054 component *(uL13c) of large plastid ribosomal-subunit proteome emb1473 0.7877810851036696 53 Bra020809 protein involved in PS-II assembly *(HCF244) HCF244 0.787594178729984 55 Bra000687 subunit delta of peripheral CF1 subcomplex of ATP synthase complex PDE332, ATPD 0.7839923702517816 55 Bra001747 phosphoglycerate dehydrogenase. EC_1.1 oxidoreductase acting on CH-OH group of donor 3-PGDH, PGDH3 0.7826354978313714 56 Bra040773 component *(bL34c) of large plastid ribosomal-subunit proteome PRPL34 0.7807009191521096 95 Bra028181 small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer DEG24, RBCS2B 0.779191740537372 58 Bra033596 splicing factor *(CFM4) CFM4 0.778638260905628 59 Bra024367 component *(uL29c) of large plastid ribosomal-subunit proteome PRPL29 0.7783911995230988 60 Bra016134 protein involved in PS-II assembly *(Psb33) PSB33, LIL8 0.7754005329456747 61 Bra032481 component *(uL6c) of large plastid ribosomal-subunit proteome RPL6, EMB2394 0.7752853921477099 62 Bra003835 peptidyl-prolyl cis-trans isomerase *(FKBP17-2/3) 0.7736604056570481 63 Bra036763 component *(bL21c) of large plastid ribosomal-subunit proteome RPL21C, ASD 0.772068745094312 67 Bra027877 glutamyl-tRNA reductase *(HEMA). EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor HEMA1, GluTR, AtHEMA1 0.7703501562227326 65 Bra040120 ribose 5-phosphate isomerase. EC_5.3 intramolecular oxidoreductase. ribose 5-phosphate isomerase EMB3119 0.7700927340836143 66 Bra009299 protein involved in photoprotection *(MPH1) MPH1 0.7699129229005883 67 Bra007750 component *(PetM/VII) of cytochrome b6/f complex PetM 0.7692884151899714 68 Bra000234 NADPH-dependent thioredoxin reductase *(NTRC) NTRC 0.7691711113556575 69 Bra027294 Rab GTPase-activating protein *(RabGAP10). uroporphyrinogen III decarboxylase *(HEME). EC_4.1 carbon-carbon lyase 0.7680932395463876 70 Bra005134 component *(bTHXc) of small plastid ribosomal-subunit proteome PSRP4 0.7664452161323109 72 Bra017596 peptidyl-prolyl cis-trans isomerase *(FKBP13) ATFKBP13, FKBP13 0.7658923704167806 73 Bra033859 glycerate:glycolate transporter. glycerate:glycolate transporter *(PLGG1) AtLrgB, LrgB, PLGG, PLGG1 0.7641479225377638 74 Bra016123 mRNA chaperone *(RLSB/BSF) PBR1, BSF, RLSB, PDE338 0.7637666216343711 75 Bra005865 plastidial protease *(EGY) ATEGY2, EGY2 0.7636778550877651 76 Bra022734 component *(uL24c) of large plastid ribosomal-subunit proteome RPL24, SVR8 0.763378917061765 77 Bra025534 component *(bL27c) of large plastid ribosomal-subunit proteome PRPL27, RPL27 0.7617747887003767 78 Bra024365 not classified 0.760495473113671 79 Bra032098 not classified 0.760495473113671 80 Bra037364 component *(uL5c) of large plastid ribosomal-subunit proteome CBE1 0.7597818051353895 81 Bra017269 mTERF-type transcription factor mTERF 3, EMB3114, SL1 0.7584910588319222 82 Bra025431 small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer DEG24, RBCS2B 0.755845115097768 83 Bra013314 component *(CHLI) of magnesium-chelatase complex. EC_6.6 ligase forming nitrogen-metal bond CHL11, CH-42, LOST1, CH42, CHLI-1, CHLI1 0.7553073757997532 96 Bra012595 EC_6.6 ligase forming nitrogen-metal bond. component *(CHLI) of magnesium-chelatase complex CHL11, CH-42, LOST1, CH42, CHLI-1, CHLI1 0.754761316713031 85 Bra025305 component *(bL12c) of large plastid ribosomal-subunit proteome RPL12-A, RPL12 0.7543975638167968 86 Bra040103 not classified 0.7539053581875813 87 Bra016672 not classified FNRL 0.7538717975312099 88 Bra034761 light-responsive regulatory protein *(SEP4) 0.7530807439681827 89 Bra030268 not classified 0.7528227580871629 90 Bra038081 protein involved in PS-I assembly *(PPD1) PPD1 0.7524726805742534 91 Bra000036 deubiquitinase *(OTU3-4) OTU3 0.7522454307992524 92 Bra003053 not classified TL17 0.7520798249174399 93 Bra006182 EC_5.2 cis-trans-isomerase. peptidyl-prolyl cis-trans isomerase. component *(PnsL5) of NDH lumen subcomplex L CYP20-2, Pnsl5, ATCYP20-2 0.7505841807504451 94 Bra031147 regulatory protein *(THF1) of thylakoid biogenesis THF1, PSB29 0.7505423555452664 95 Bra026948 EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor. glyceraldehyde 3-phosphate dehydrogenase *(GAPDH) GAPA-2 0.7499915235651419 96 Bra035865 not classified EMB2759 0.7498652855704231 97 Bra037389 protein involved in ferredoxin-NADP oxidoreductase membrane-tethering *(TROL) TROL 0.7493369711384 98 Bra016522 linker protein *(LHCa6) between PS-I complex and NDH complex LHCA2*1, Lhca6 0.7491772005666097 99