Sequence Description Alias PCC hrr Bra040131 histone deacetylase *(HDA8). deacetylase component *(HDA19) of SNL-HDA19 histone deacetylase complex. EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond ATHDA19, HD1, HDA1, HDAC19, HDA19, RPD3A, ATHD1 0.933384257327011 1 Bra023416 component *(Pfs2/FY) of Cleavage and Polyadenylation Specificity Factor (CPSF) complex. cleavage and polyadenylation specificity factor *(FY) FY, WDR33 0.9155293041775027 2 Bra036615 component *(LSm4) of U6-associated LSm accessory ribonucleoprotein complex LSM4, emb1644 0.9090099240625491 5 Bra029530 component *(MED16) of tail module of MEDIATOR transcription co-activator complex IEN1, AtSFR6, YID1, MED16, GLH2, SFR6 0.9089179493806351 13 Bra040447 peptidyl-prolyl cis-trans isomerase *(CYP63/CYP95). EC_5.2 cis-trans-isomerase 0.9074043765126325 7 Bra039057 component *(NRP-ABCDE6) of RNA polymerase complexes NRPD6A, NRPE6A, NRPB6A 0.9064674066516535 6 Bra018407 component *(SRm160) of RNA quality control Exon Junction complex 0.9049588966377319 7 Bra001797 deubiquitinase component *(GID6/UBP14) of GID ubiquitination complex TARANI, TTN6, PER1, DA3, ATUBP14, TNI, UBP14 0.9040737733869466 11 Bra024021 substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin ligase complex DCAF1 0.903304245863722 9 Bra019452 auxiliary component *(NAA35) of NatC N-terminal acetylase complex MAK10, ATMAK10 0.9009075681764399 10 Bra034288 not classified 0.900393186342997 11 Bra037299 protein factor (NERD) of non-canonical RdDM pathway NERD 0.8979552790540378 16 Bra027974 not classified 0.8975235975457955 22 Bra021701 protein factor *(PRPF8/SUS2) of MAC spliceosome-associated complex SUS2, EMB177, EMB33, PRP8, EMB14 0.8957450705039661 15 Bra040190 nucleocytoplasmic transport karyopherin *(XPO4) XPO4 0.8957009405933117 15 Bra004414 not classified 0.8933044399772517 16 Bra016924 scaffold nucleoporin of nuclear pore complex *(NUP93) 0.8921822403223307 17 Bra034692 scaffold component *(VCS) of mRNA decapping complex VCS 0.8915328526396092 59 Bra012760 not classified 0.8903828662168983 19 Bra040967 not classified 0.888872188142169 25 Bra011368 CLK/LAMMER protein kinase. EC_2.7 transferase transferring phosphorus-containing group AME3 0.8873915608763827 21 Bra007778 protein kinase *(MLK). EC_2.7 transferase transferring phosphorus-containing group. MLK protein kinase MLK3, PPK4, AEL1 0.8871387476567926 22 Bra015006 EC_1.8 oxidoreductase acting on sulfur group of donor. glutathione reductase *(GR) ATGR1, GR1 0.8865937400627582 28 Bra040649 MYB-RELATED transcription factor *(ALY). component *(ALY) of DREAM cell cycle regulatory complex ALY2, ATALY2 0.8859088377693015 24 Bra034860 methylation reader Alfin of PRC1 complex AL2 0.8858108812666122 25 Bra030554 pre-mRNA-processing protein *(PRP39) PRP39a, PRP39 0.8839775863550914 26 Bra003342 deadenylase component *(CCR4) of mRNA deadenylation CCR4-NOT complex AtCCR4a 0.8816740175601812 27 Bra000196 component *(BTE1) of DREAM cell cycle regulatory complex 0.8811983706216244 28 Bra030884 regulatory RNA helicase *(RH20/RH30) of virus replication AtRH20, RH20 0.8807675394228545 29 Bra009379 NAC-type transcription factor NAC082, VNI1, ANAC082 0.8795316267745237 30 Bra027882 MYB-RELATED transcription factor *(DRMY) DRMY1 0.8784275159784065 31 Bra009163 nucleocytoplasmic export karyopherin *(XPO7) XPO7 0.8780696184757671 32 Bra006713 EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen 0.8775732543610574 39 Bra019137 not classified APUM6, PUM6 0.8763588819427238 90 Bra012053 scaffold nucleoporin of nuclear pore complex *(NUP205) EMB3142, EDS4 0.8752719454319036 35 Bra031393 phosphometabolite transporter *(TPT/PPT/GPT/XPT) ATGPT2, GPT2 0.8752155000574615 36 Bra009456 regulatory factor *(AIF1) of anther dehiscence. NAC-type transcription factor NAC2, anac078, NAC78, NTL11 0.8746182650400297 37 Bra013431 protein factor *(PRPF8/SUS2) of MAC spliceosome-associated complex SUS2, EMB177, EMB33, PRP8, EMB14 0.874448984980032 39 Bra016961 deubiquitinase *(UBP5/8-11) ATUBP5, PDE323, UBP5 0.8740100335628724 61 Bra026639 chaperone component *(SDJ) of SUVH-SDJ methylation reader complex SDJ2, DNAJ2 0.8735351633171969 41 Bra004858 not classified 0.8735152113007121 42 Bra031651 component *(NF-YC) of NF-Y transcription factor complex NF-YC9, HAP5C 0.8727767771298046 86 Bra002136 not classified 0.8724558127701372 69 Bra000719 component *(SPT16) of FACT histone chaperone complex SPT16 0.871550166257097 74 Bra037150 component *(U1-70K) of U1 snRNP complex. chromatin remodeling factor *(DDM1) CHR1, DDM1, SOM4, CHA1, SOM1, CHR01, ATDDM1 0.8702355552568823 46 Bra030524 component *(XPD) of multifunctional TFIIh complex. meiotic crossover accessory protein *(BVF1). component *(XPD) of TFIIh basal transcription factor complex UVH6, ATXPD 0.8690519882787532 48 Bra017569 scaffold component *(CUL4) of CUL4-DDB1 ubiquitination complexes CUL4, ATCUL4 0.8681412420001586 50 Bra019432 component *(HIRA) of HIRA chaperone complex HIRA 0.8677500816954368 58 Bra036686 not classified RIN13 0.866781757586916 53 Bra038764 subcluster CPL phosphatase. phosphatase component *(CPL) of chromatin silencing regulator complex. group-I RNA polymerase-II phosphatase CPL1, ATCPL1, FRY2, SHI4, RCF2 0.8662719832518236 55 Bra013562 RNA polymerase-II nuclear import factor *(GPN1) QQT2, GPN1 0.8660250509581313 56 Bra028392 component *(Fts3/10) of FtsH3/10 matrix-AAA protease heterodimers AtFTSH3, FTSH3 0.8660091468325488 67 Bra024624 RNA splicing factor *(RSZ21/22) RSZP21, RSZ21, SRZ-21, At-RSZ21, SRZ21 0.8659780242555488 58 Bra017181 not classified 0.8657679178496086 96 Bra018630 regulatory component *(DCP1) of mRNA decapping complex DCP1, ATDCP1 0.8654336586932959 77 Bra025148 not classified 0.8651260759835635 62 Bra006698 component *(NOT2) of mRNA deadenylation CCR4-NOT complex AtVIP2, VIP2, NOT2b 0.8648025841965808 63 Bra011858 not classified Drg1-1 0.8646175985163799 64 Bra007089 not classified 0.8633536342007719 75 Bra003464 miRNA cytidylyltransferase *(NTP2/6/7/8) NTP8 0.8625263875078707 67 Bra018303 WRKY-type transcription factor WRKY21 0.8623502819955281 68 Bra017049 scaffold nucleoporin of nuclear pore complex *(ELYS) ESD6, HOS1 0.8619097473510547 69 Bra013848 small subunit *(SAE1) of E1 SUMO ubiquitin-activating enzyme complex ATSAE1A, AT-SAE1-1, SAE1A 0.8611292241832048 70 Bra035858 deacetylase component *(HDA19) of SNL-HDA19 histone deacetylase complex. EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond. histone deacetylase *(HDA8). component *(HDA6) of histone deacetylation complex SIL1, HDAC6, ATHDA6, AXE1, RTS1, HDA6, RPD3B 0.8610692126228526 71 Bra003360 assembly factor (SAD2/EMA) of RNA-induced silencing complex (RISC) assembly 0.860678878754488 72 Bra013873 GeBP-type transcription factor 0.8600764489331055 83 Bra012956 component *(SMC6) of homologous recombination repair Smc5-Smc6 complex MIM, ATRAD18, SMC6B 0.8599234774335405 75 Bra006262 EC_1.1 oxidoreductase acting on CH-OH group of donor 0.859168841259815 78 Bra024276 not classified ATSC35, At-SC35, SC35 0.8589129770868267 79 Bra010607 component *(bL12m) of large mitoribosomal-subunit proteome 0.8589086029568194 80 Bra009568 regulatory protein *(MOS11) of helicase activity MOS11 0.8588976050646298 81 Bra022445 pre-mRNA-processing protein *(PRP40A/B) PRP40B, ATPRP40B 0.858786624974948 82 Bra022762 auxiliary factor of DNA methylation pathway *(MORC) AtMORC4, MORC4 0.8582639733522116 84 Bra029577 core adaptor component *(DDB1) of CUL4-based E3 ubiquitin ligase complexes. core adaptor component *(DDB1) of CUL4-based E3 ubiquitin ligase complexes DDB1A 0.8572643772702244 86 Bra005504 component *(MAC3) of MAC spliceosome-associated complex. E3 ubiquitin protein ligase *(PUB60). substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin ligase complex PUB60, MAC3B 0.8568110652570512 87 Bra031337 not classified 0.8565400671474033 88 Bra007752 component *(SMU2) of SMU splicing factor complex SMU2 0.8554506455653464 90 Bra033534 nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha) IMPA-2 0.8553193589558445 91 Bra002071 not classified 0.8544366025724858 93 Bra023114 RNA splicing factor *(RSZ32/33) RS2Z33, RSZ33, ATRSZ33, AT-RS2Z33 0.8544300673122486 94 Bra035105 nucleoporin of nuclear pore complex *(NUA) AtTPR, NUA 0.8540460401797308 96 Bra020317 regulatory protein *(MPP6) of Exosome complex 0.8537546034201691 97 Bra008863 histone H3K36 methylation reader *(EML) EML3, AtEML3 0.8531521450497423 98 Bra002942 pyruvate decarboxylase *(PDC). EC_4.1 carbon-carbon lyase PDC2 0.8529392202850361 99