Sequence Description Alias PCC hrr Bra002879 component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im) complex 0.9411220743043648 1 Bra000719 component *(SPT16) of FACT histone chaperone complex SPT16 0.93570884194113 2 Bra005691 EC_2.7 transferase transferring phosphorus-containing group. mRNA capping enzyme 0.9232677124446806 3 Bra003464 miRNA cytidylyltransferase *(NTP2/6/7/8) NTP8 0.9213162328843255 4 Bra000126 component *(UPF2) of RNA quality control Exon Junction complex UPF2 0.9193006789791549 5 Bra018217 E3 UFM ubiquitin ligase UFL1 0.917692878532299 6 Bra020249 E3 SUMO ubiquitin ligase *(SIZ1) SIZ1, ATSIZ1 0.9157972482475656 7 Bra025262 transcriptional co-activator *(BET/GTE) GTE8 0.9125146301131057 18 Bra031271 histone H3 methylation reader (PWO) of PRC2 histone methylation complex PWWP3 0.9120370870138601 9 Bra041007 pre-mRNA-processing protein *(PRP40A/B) ATPRP40A, PRP40A 0.9108658621854752 10 Bra029068 regulatory component *(HIZ2) of adenosine N6-methyltransferase complex 0.9108449258117877 11 Bra002677 component *(Fip1) of Cleavage and Polyadenylation Specificity Factor (CPSF) complex FIPS5, FIP1[V], ATFIPS5, FIP1, ATFIP1[V] 0.9099802282298989 12 Bra004464 not classified 0.9080349711539951 13 Bra029059 not classified 0.9063812272959364 14 Bra004413 component *(MED5/MED24/MED33) of tail module of MEDIATOR transcription co-activator complex MED33B, REF4, MED5B 0.9050417767992411 26 Bra011410 peptidyl-prolyl cis-trans isomerase *(CYP57) of MAC spliceosome-associated complex. EC_5.2 cis-trans-isomerase AtCYP57, CYP57 0.9037076567831882 23 Bra019137 not classified APUM6, PUM6 0.9009317045910462 24 Bra003319 transcriptional co-repressor *(ECAP) ECAP 0.8988345454476402 18 Bra026248 component *(MPE1) of Cleavage and Polyadenylation Specificity Factor (CPSF) complex PQT3 0.8987215172300086 19 Bra015276 splicing factor *(SMP) SMP1 0.8974189193429223 24 Bra014060 component *(EXO70) of Exocyst complex EXO70F1, ATEXO70F1 0.8969714735782552 31 Bra001212 regulatory component *(PP4R3) of PP4 phosphatase complex. regulatory component *(PP4R3) of PP4 phosphatase complex SMEK1, PP4R3, PSY2L 0.8967106991698164 23 Bra024999 class II ARF-GAP ARF-GTPase-activating protein AGD9 0.8966206968657239 23 Bra006365 regulatory component *(AIPP2) of chromatin silencing regulator complex PAIPP2, PHD2 0.8953276011232428 24 Bra010869 component *(RINGLET/RLT) of ISWI chromatin remodeling complex RLT1, HB-1 0.895265453346897 25 Bra018963 not classified 0.8951526686756047 26 Bra019885 cohesin cofactor *(WAPL) WAPL1, AtWAPL1 0.8951335351784063 27 Bra025211 not classified 0.8947007920013721 28 Bra040967 not classified 0.8946988164845854 29 Bra000826 not classified 0.8946847867928124 30 Bra027964 not classified 0.8940881084308535 50 Bra004812 component *(CWC25) of MAC spliceosome-associated complex 0.8939610474408803 32 Bra038273 component *(NFRKB1) of INO80 chromatin remodeling complex NFRKB1 0.893436766760497 33 Bra010737 E3 ubiquitin ligase *(UPL3) KAK, UPL3 0.8933654513566117 79 Bra034172 component *(SF3B3) of splicing factor 3B complex SAP130b, AtSAP130b 0.892956633636658 35 Bra010976 component *(THOC2/Tho2) of mRNP trafficking THO subcomplex EMB2793, AtTHO2, THO2 0.8927456862754698 36 Bra038240 RING-H2-class CTL-subclass E3 ubiquitin ligase CTL18 0.8927242211339627 37 Bra036568 methylation reader Alfin of PRC1 complex AL4 0.8923517008016302 38 Bra002412 not classified SCS1 0.8911344980459311 39 Bra000600 component *(RQC2) of Ribosome-associated Quality Control (RQC) complex emb1441 0.8906887459125652 40 Bra004551 substrate adaptor *(LRB) of CUL3-BTB E3 ubiquitin ligase complex LRB1 0.8896550778120963 41 Bra037286 assembly factor (TRN1) of RNA-induced silencing complex (RISC) assembly. nucleocytoplasmic import karyopherin *(IMB2) ATTRN1, TRN1, IMB2 0.88938306678755 42 Bra009411 component *(VPS36) of ESCRT-II complex VPS36 0.8892014168406972 46 Bra023387 RNA helicase *(Prp16) PINP1, CUV, PRP16, EMB3011, FEY 0.8888078212656727 44 Bra035746 ethylene signal transducer *(EIN3/EIL). EIL-type transcription factor AtEIN3, EIN3 0.8885185938374889 57 Bra035468 SMARCF component *(LFR) of SWI/SNF chromatin remodeling complex 0.8874010919089597 46 Bra029520 component *(DFM1) of ER-associated protein degradation (ERAD) machinery DER2.2 0.8856587499504035 47 Bra016961 deubiquitinase *(UBP5/8-11) ATUBP5, PDE323, UBP5 0.8854492144872164 48 Bra006346 mitotic-specific Kleisin-type component *(SCC1) of cohesin regulator complex SYN4, ATRAD21.3 0.8848881213129168 49 Bra040510 component *(SNL) of histone deacetylase machineries SNL1 0.8846820589356971 50 Bra033534 nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha) IMPA-2 0.8846016145193606 51 Bra013562 RNA polymerase-II nuclear import factor *(GPN1) QQT2, GPN1 0.8845943636857856 52 Bra028531 scaffold component *(NOT1) of mRNA deadenylation CCR4-NOT complex NOT1 0.8841798605778952 53 Bra005994 associated component *(HDC1) of histone deacetylase machineries HDC1, RXT3-like 0.884087443129215 54 Bra036836 protein factor (NERD) of non-canonical RdDM pathway 0.8839579701245651 55 Bra013735 EC_6.2 ligase forming carbon-sulfur bond LACS4 0.8838147252282875 56 Bra028208 not classified 0.8830803443481077 57 Bra007814 CHD3-type chromatin remodeling factor *(PKL/PKR) SSL2, CHR6, CHD3, GYM, HRB2, EPP1, LWR1, CKH2, PKL 0.8816554234478244 58 Bra035572 acyl-CoA:cholesterol acyltransferase. component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing regulator complex EDM2 0.8816368883115613 62 Bra027727 regulatory protein *(DUO3) of male germ cell division DUO3 0.8803268762204931 60 Bra038298 not classified 0.8791150677377247 61 Bra029862 inner nuclear envelope component *(Cter-SUN) of SUN-WIP cytoskeleton-nucleoskeleton-linker complex SUN2, ATSUN2 0.8788729755915143 62 Bra017422 ATPase component *(Etl1) CHA19, CHR19, ETL1 0.8786278004404081 63 Bra029530 component *(MED16) of tail module of MEDIATOR transcription co-activator complex IEN1, AtSFR6, YID1, MED16, GLH2, SFR6 0.8780270163713398 94 Bra014161 component *(SRP54) of SRP (signal recognition particle) complex 0.8778845855341183 74 Bra035888 bHLH-type transcription factor. regulatory protein (CIB) of blue light perception. nucleocytoplasmic transport karyopherin *(MOS14) MOS14 0.877212017735815 67 Bra017400 not classified emb1579, RSA1 0.8770657979134743 68 Bra025318 DNA repair endonuclease *(XPG) UVR1, UVH3 0.8769318050074555 69 Bra021325 not classified 0.8768732283009371 70 Bra022091 Nonsense-Mediated mRNA Decay effector protein *(UPF1) UPF1, LBA1, ATUPF1 0.8767385644971493 71 Bra009045 catalytic component *(CDKC-1/CTK1) of polymerase-II kinase complex. EC_2.7 transferase transferring phosphorus-containing group. CDKC protein kinase. catalytic component *(CDKC) of cyclin-dependent kinase complex CDKC;1 0.8766763791429839 72 Bra013792 not classified 0.8765155281362883 74 Bra028790 NAC-type transcription factor NAC2, anac078, NAC78, NTL11 0.8754261077830702 75 Bra024264 phosphatidylinositol 4-kinase *(PI4K-beta). EC_2.7 transferase transferring phosphorus-containing group PI4KBETA1, PI-4KBETA1 0.8753435891701489 76 Bra010510 component *(NRPB1) of RNA polymerase II complex NRPB1, RNA_POL_II_LS, RPB1, RNA_POL_II_LSRNA_POL_II_LS 0.8752613723924727 77 Bra030564 EC_2.7 transferase transferring phosphorus-containing group. endomembrane trafficking ATG6-stability regulator protein *(TRAF1). ethylene receptor protein *(ETR/ERS) MUSE13, TRAF1b 0.8750301483419325 78 Bra000622 M18-class aspartyl aminopeptidase *(DAP). EC_3.4 hydrolase acting on peptide bond (peptidase) DAP1 0.8749127366032234 79 Bra019432 component *(HIRA) of HIRA chaperone complex HIRA 0.8747297439887314 80 Bra003360 assembly factor (SAD2/EMA) of RNA-induced silencing complex (RISC) assembly 0.8746702801008608 81 Bra022429 PHD-type transcription factor HAT3.1 0.8743165904617989 82 Bra001797 deubiquitinase component *(GID6/UBP14) of GID ubiquitination complex TARANI, TTN6, PER1, DA3, ATUBP14, TNI, UBP14 0.8742770917629417 83 Bra001111 regulatory protein *(FLK) of autonomous floral-promotion pathway FLK 0.8737584617979831 84 Bra011030 regulatory component *(RPN1) of 26S proteasome RPN1B, ATRPN1B 0.8732768886460114 86 Bra023043 not classified 0.8728421418459767 87 Bra037120 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase complex SKIP2, VFB4 0.8714970023458739 88 Bra019452 auxiliary component *(NAA35) of NatC N-terminal acetylase complex MAK10, ATMAK10 0.8712935896307838 89 Bra015278 not classified CTN 0.8709946872933165 90 Bra035932 DNA exonuclease *(NEN) NEN2 0.8703434111720036 91 Bra003932 transcriptional co-regulator *(Oberon) OBE4, TTA2 0.8701456151701898 92 Bra013811 EC_1.6 oxidoreductase acting on NADH or NADPH. NADPH:cytochrome P450 reductase *(ATR) ATR1, AR1, AtCPR1 0.8700058704614767 93 Bra037299 protein factor (NERD) of non-canonical RdDM pathway NERD 0.8700054772470995 94 Bra011535 subunit gamma of cargo adaptor F-subcomplex gamma2-COP 0.8699496940882899 95 Bra009076 not classified 0.869588459551906 98 Bra032664 scaffold component *(NOT1) of mRNA deadenylation CCR4-NOT complex NOT1 0.869360687326982 99 Bra011487 E3 ubiquitin ligase component *(Doa10) of ER-associated protein degradation (ERAD) machinery SUD1, CER9 0.8693350865215493 100