Sequence Description Alias PCC hrr Bra018617 basal Sigma-type transcription factor SIGA, SIGB, ATSIG1, ATSIG2, SIG1, SIG2, ABC1 0.855718569651046 11 Bra038389 not classified CP33C 0.8551198619381908 8 Bra033596 splicing factor *(CFM4) CFM4 0.8487656811433767 5 Bra029140 assembly factor CRR1 involved in NDH complex assembly CRR1 0.8372027829998613 18 Bra010483 plastidial ribonucleoprotein *(CP31) ATRBP33, ATRBP31, CP31A, RBP31, CP33a, CP31 0.8315901411140215 29 Bra014681 not classified PPD6 0.8216540548959341 41 Bra029776 not classified 0.8209242236115111 32 Bra033438 plastidial ribonucleoprotein *(CP33a) PDE322, CP33 0.8143878005515681 36 Bra030514 protein involved in PS-II assembly *(LPA1) LPA1 0.8096155226824753 9 Bra034761 light-responsive regulatory protein *(SEP4) 0.8063002283615999 10 Bra011081 EC_6.1 ligase forming carbon-oxygen bond. translation elongation factor *(EF-Ts). aspartate-tRNA ligase 0.8051370420759202 55 Bra007282 component *(cL37) of large plastid ribosomal-subunit proteome PSRP5 0.8027462403113459 66 Bra016977 dihydroxyacetone phosphate reductase *(SFD1). EC_1.1 oxidoreductase acting on CH-OH group of donor GLY1, SFD1 0.8003221865042294 13 Bra015668 plastidial ascorbate peroxidase *(APX). EC_1.11 oxidoreductase acting on peroxide as acceptor TAPX 0.7997182885371429 22 Bra040427 translation ribosome recycling factor *(RRF) cpRRF, HFP108, AtcpRRF, RRF 0.7990874899412298 56 Bra039091 component *(bS21c) of small plastid ribosomal-subunit proteome GHS1, LPE2, RPS21 0.7987496606337345 50 Bra033412 protein involved in PS-II assembly *(Psb27) PSB27 0.7969829767316265 51 Bra010852 component *(bL34c) of large plastid ribosomal-subunit proteome PRPL34 0.7920916372832887 18 Bra039494 translation peptide chain release factor *(PrfB) HCF109, ATPRFB 0.7904413295925052 19 Bra001704 not classified EMB1865 0.784091303874558 48 Bra003053 not classified TL17 0.7834460371301873 21 Bra010009 dual-targeted component *(TatA) of plastidial/mitochondrial Tat protein translocase system. dual-targeted component *(TatA) of plastidial/mitochondrial Tat protein translocase system TATA 0.7775444513171847 22 Bra037997 assembly factor NDF5 involved in NDH complex assembly NDF5 0.7748470699362091 23 Bra012812 mTERF-type transcription factor PDE191, mTERF6 0.7740863940111853 24 Bra017269 mTERF-type transcription factor mTERF 3, EMB3114, SL1 0.7739663201206998 25 Bra001535 regulatory protein *(FLU) of glutamyl-tRNA reductase activity FLU 0.7717001941591048 44 Bra000234 NADPH-dependent thioredoxin reductase *(NTRC) NTRC 0.7705816134349336 27 Bra014755 protein involved in PS-II repair *(PPL1) PPL1 0.7704406672560544 58 Bra039665 not classified 0.7671050358501282 29 Bra012595 EC_6.6 ligase forming nitrogen-metal bond. component *(CHLI) of magnesium-chelatase complex CHL11, CH-42, LOST1, CH42, CHLI-1, CHLI1 0.7670262635378637 30 Bra029188 assembly factor involved in RuBisCo assembly *(RAF2) ATP1, SDIRIP1, RAF2 0.7668599584804465 85 Bra016220 EC_2.7 transferase transferring phosphorus-containing group. MAPKKK-kinase protein kinase 0.766296595903848 32 Bra012722 not classified 0.765487124365687 33 Bra035865 not classified EMB2759 0.7653435267694556 49 Bra003028 not classified EMB2737, ANU7, EMB64 0.7640392896345782 35 Bra028175 small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer RBCS3B 0.762822855182283 37 Bra001747 phosphoglycerate dehydrogenase. EC_1.1 oxidoreductase acting on CH-OH group of donor 3-PGDH, PGDH3 0.7627633060010756 49 Bra016123 mRNA chaperone *(RLSB/BSF) PBR1, BSF, RLSB, PDE338 0.762176924202523 50 Bra011679 not classified 0.7611393351404732 40 Bra013527 assembly factor CRR9 involved in NDH complex assembly CRR9 0.759985068659697 47 Bra015397 component *(uL6c) of large plastid ribosomal-subunit proteome RPL6, EMB2394 0.7573172731042425 83 Bra015164 not classified 0.7552588535038023 43 Bra016017 not classified 0.7514099039068293 44 Bra040448 component *(uL1c) of large plastid ribosomal-subunit proteome EMB3126, PRPL1 0.7483181976433577 70 Bra010749 histidine-tRNA ligase HRS1, ATHRS1 0.7442688268862167 46 Bra016989 EC_4.1 carbon-carbon lyase. uroporphyrinogen III decarboxylase *(HEME) HEME2 0.7418168575976363 48 Bra011770 ribonuclease *(RNC1) 0.7395454849180192 55 Bra010475 acyl carrier protein *(ptACP)) ACP4, AtACP4 0.739282842353708 51 Bra034277 organellar tryptophan-tRNA ligase OVA4 0.7379906461763309 62 Bra023418 component *(uL10c) of large plastid ribosomal-subunit proteome. component *(uL10) of organelle large ribosomal-subunit proteome EMB3136 0.737345347917386 53 Bra034128 Fd-dependent sulfite reductase *(SIR) SIR 0.7353851883976813 54 Bra023563 biotin carboxyl carrier component of polymeric acetyl-CoA carboxylase complex CAC1-A, CAC1A, CAC1, BCCP1, BCCP, BCCP-1 0.7349554979345291 85 Bra003776 component *(uS9c) of small plastid ribosomal-subunit proteome TWN3, SOT8, RPS9, PRPS9 0.7349182097049926 56 Bra020926 translation elongation factor *(EF-Tu) SVR11, RAB8D, ATRAB8D, ATRABE1B, RABE1b 0.7322585769016771 58 Bra000791 leucine-tRNA ligase EMB2369 0.7314302174124595 59 Bra001415 EC_1.11 oxidoreductase acting on peroxide as acceptor. typical 2-Cys peroxiredoxin *(2-CysPrx) 2CPA 0.7297034445931087 82 Bra021450 protease *(Deg) DEG2, DEGP2, EMB3117 0.7285305269223497 77 Bra036739 LHC-related protein *(OHP2) OHP2 0.7255285035137972 64 Bra015144 endoribonuclease *(RNase E) RNEE/G, RNE 0.724947763385675 65 Bra002973 component *(uL24c) of large plastid ribosomal-subunit proteome RPL24, SVR8 0.7223454924127165 98 Bra001223 not classified 0.7216130763625392 68 Bra004639 NADPH-dependent thioredoxin reductase *(NTRC) NTRC 0.7210545765185595 69 Bra040120 ribose 5-phosphate isomerase. EC_5.3 intramolecular oxidoreductase. ribose 5-phosphate isomerase EMB3119 0.7158166192392038 90 Bra015826 protein involved in PS-II assembly *(LQY1). protein disulfide isomerase *(LQY1) LQY1 0.714138835747584 92 Bra010351 glutaredoxin GrxC5 0.7139661264120266 77 Bra032481 component *(uL6c) of large plastid ribosomal-subunit proteome RPL6, EMB2394 0.7118079860371527 100 Bra022593 component *(cpTatB) of thylakoid membrane Tat translocation system. protein involved in PS-II assembly *(HCF106) HCF106 0.7108249965090284 77 Bra038081 protein involved in PS-I assembly *(PPD1) PPD1 0.7083480498949704 89 Bra000036 deubiquitinase *(OTU3-4) OTU3 0.7067717059142553 82 Bra025210 tonoplast intrinsic protein *(TIP) GAMMA-TIP2, SITIP, TIP2, TIP1;2 0.7043310248569873 88 Bra026257 palmitoyl-protein thioesterase *(PPT). EC_3.1 hydrolase acting on ester bond 0.7032477496796825 92 Bra040469 ferredoxin targeted to NADP reduction ATFD2, FD2, FED A 0.7001861622124498 97 Bra004875 not classified 0.6995840849160557 99