Sequence Description Alias PCC hrr Bra018617 basal Sigma-type transcription factor SIGA, SIGB, ATSIG1, ATSIG2, SIG1, SIG2, ABC1 0.9109299276819016 1 Bra009965 not classified 0.9089666809388849 2 Bra027196 initiation factor *(MFP1) MFP1 0.902494329766865 3 Bra032984 component *(bS21c) of small plastid ribosomal-subunit proteome GHS1, LPE2, RPS21 0.894395992018229 6 Bra035563 nascent polypeptide chaperone *(TIG) HP65b, TIG1 0.8937111394974658 11 Bra033412 protein involved in PS-II assembly *(Psb27) PSB27 0.89080933011225 6 Bra007055 component *(bL17c) of large plastid ribosomal-subunit proteome PRPL17 0.8901205743031454 16 Bra027273 component *(bS20c) of small plastid ribosomal-subunit proteome PRPS20 0.8899103985925437 18 Bra040773 component *(bL34c) of large plastid ribosomal-subunit proteome PRPL34 0.8836243061262969 13 Bra007282 component *(cL37) of large plastid ribosomal-subunit proteome PSRP5 0.8786973875973674 10 Bra021936 protein involved in PS-I assembly *(PSA2) PSA2, EDA3 0.8781884846018129 11 Bra040427 translation ribosome recycling factor *(RRF) cpRRF, HFP108, AtcpRRF, RRF 0.8689918071371433 20 Bra037439 isoleucine-tRNA ligase. EC_6.1 ligase forming carbon-oxygen bond OVA2 0.8657035057735156 13 Bra014681 not classified PPD6 0.8639454479535619 15 Bra002424 component *(Tic100) of inner envelope TIC-20 complex TIC100, emb1211 0.8609268704063667 15 Bra015574 component *(uL4c) of large plastid ribosomal-subunit proteome RPL4, PRPL4, EMB2784 0.8605031461438873 31 Bra020666 EC_6.1 ligase forming carbon-oxygen bond. isoleucine-tRNA ligase OVA2 0.8589471635579974 17 Bra024957 component *(bL19c) of large plastid ribosomal-subunit proteome PRPL19 0.8556487442571634 19 Bra035772 SRP insertion system TIC-to-SRP handover factor *(LTD) GDC1, LTD 0.8434529773298278 19 Bra021879 component *(uS5c) of small plastid ribosomal-subunit proteome SCA1, RPS5, EMB3113, PRPS5 0.843115979065215 27 Bra016123 mRNA chaperone *(RLSB/BSF) PBR1, BSF, RLSB, PDE338 0.8423250788225903 21 Bra008373 component *(uL13c) of large plastid ribosomal-subunit proteome emb1473 0.8373279842131013 25 Bra038453 plastidial RNA processing factor *(SVR7) SVR7 0.8365548252934295 31 Bra006248 component *(uS13c) of small plastid ribosomal-subunit proteome EMB3137 0.8362763534355708 46 Bra037609 component *(bL9c) of large plastid ribosomal-subunit proteome RPL9 0.8361485454438684 38 Bra002101 nucleotide exchange factor *(CGE) CGE1, EMB1241 0.8360549645844214 26 Bra027163 RlmN-type rRNA methyltransferase 0.8335667147538668 27 Bra033287 not classified 0.8335037405228032 28 Bra002665 scaffold component *(LCAA) of Mg-protoporphyrin IX monomethylester cyclase complex LCAA/YCF54, EMB3143 0.8327905957654721 29 Bra029140 assembly factor CRR1 involved in NDH complex assembly CRR1 0.8327034290540946 30 Bra033596 splicing factor *(CFM4) CFM4 0.8314202735560237 31 Bra002177 divinyl chlorophyllide-a 8-vinyl-reductase PCB2, DVR 0.8304689088228703 32 Bra038389 not classified CP33C 0.8287293046086353 33 Bra010483 plastidial ribonucleoprotein *(CP31) ATRBP33, ATRBP31, CP31A, RBP31, CP33a, CP31 0.8236269080997894 34 Bra017165 not classified 0.8235678724622041 35 Bra038621 nucleoside diphosphate kinase. EC_2.7 transferase transferring phosphorus-containing group NDPK2, NDPK IA, NDPK IA IA, NDPK1A, ATNDPK2 0.8229729644396895 64 Bra032481 component *(uL6c) of large plastid ribosomal-subunit proteome RPL6, EMB2394 0.8220255842937748 37 Bra029188 assembly factor involved in RuBisCo assembly *(RAF2) ATP1, SDIRIP1, RAF2 0.8205273848468707 38 Bra003253 bZIP class-A transcription factor. component *(cL37) of large plastid ribosomal-subunit proteome DPBF3, AREB3 0.81971010329212 39 Bra011565 rbcL-mRNA stability factor *(MRL1) PDE346, MRL1 0.8194240305910058 40 Bra006622 not classified 0.8161271086935071 41 Bra024046 not classified PDE327 0.8157832589975609 42 Bra006352 biotin carboxyl carrier component of polymeric acetyl-CoA carboxylase complex CAC1-A, CAC1A, CAC1, BCCP1, BCCP, BCCP-1 0.814725612817609 43 Bra019210 plastidial ribonucleoprotein *(CP31) ATRBP33, ATRBP31, CP31A, RBP31, CP33a, CP31 0.8137606803840663 55 Bra006029 EC_3.6 hydrolase acting on acid anhydride. plastidial pyrophosphatase PPa6, AtPPa6 0.8135626044919287 45 Bra001618 initiation factor *(MFP1) MFP1 0.812293397975089 46 Bra034277 organellar tryptophan-tRNA ligase OVA4 0.8122231085106302 47 Bra039904 not classified 0.8111991594111807 48 Bra034729 EC_2.7 transferase transferring phosphorus-containing group PGKp1, PGK1 0.8109276401751794 49 Bra015023 EC_4.2 carbon-oxygen lyase. dihydroxy-acid dehydratase. dihydroxy-acid dehydratase DHAD 0.8104145815277626 50 Bra009181 EC_1.11 oxidoreductase acting on peroxide as acceptor. typical 2-Cys peroxiredoxin *(2-CysPrx) 2-Cys Prx B, 2CPB 0.8098027963808592 51 Bra040142 cofactor of plastid-encoded RNA polymerase *(PAP1/TAC3) PTAC3, PDE324 0.8094154819675253 52 Bra022593 component *(cpTatB) of thylakoid membrane Tat translocation system. protein involved in PS-II assembly *(HCF106) HCF106 0.809265552938254 53 Bra039091 component *(bS21c) of small plastid ribosomal-subunit proteome GHS1, LPE2, RPS21 0.8072674199296113 54 Bra039542 protein involved in PS-I assembly *(PPD1) PPD1 0.8051370420759202 55 Bra032124 translation initiation factor *(IF-3) SVR9, AtIF3-2, AtINFC-2 0.8044858775347877 74 Bra007655 EC_5.2 cis-trans-isomerase. peptidyl-prolyl cis-trans isomerase ROC4, CYP20-3 0.8037661407419254 57 Bra015397 component *(uL6c) of large plastid ribosomal-subunit proteome RPL6, EMB2394 0.8031030636440238 58 Bra035865 not classified EMB2759 0.8022219805178813 59 Bra009998 assembly factor involved in RuBisCo assembly *(RAF1) 0.8017895769170433 60 Bra016522 linker protein *(LHCa6) between PS-I complex and NDH complex LHCA2*1, Lhca6 0.8000957212444186 61 Bra033438 plastidial ribonucleoprotein *(CP33a) PDE322, CP33 0.7970047953411528 62 Bra010351 glutaredoxin GrxC5 0.796021232336498 63 Bra007404 ketol-acid reductoisomerase. ketol-acid reductoisomerase. EC_1.1 oxidoreductase acting on CH-OH group of donor 0.7942575792871802 64 Bra001415 EC_1.11 oxidoreductase acting on peroxide as acceptor. typical 2-Cys peroxiredoxin *(2-CysPrx) 2CPA 0.7938343715151777 65 Bra010498 chaperone *(cpHsc70)) cpHsc70-1 0.793197062025123 66 Bra027021 translation elongation factor *(EF-G) ATSCO1/CPEF-G, ATSCO1, SCO1 0.7930481758622423 67 Bra002973 component *(uL24c) of large plastid ribosomal-subunit proteome RPL24, SVR8 0.7925073261635796 68 Bra003176 component *(bL17c) of large plastid ribosomal-subunit proteome PRPL17 0.792465115148681 69 Bra013747 component *(FtsHi) of protein translocation ATPase motor complex. regulatory component *(SUN3/4/5) of ER luminal chaperone complex ARC1, FtsHi1 0.7921890951294877 70 Bra027294 Rab GTPase-activating protein *(RabGAP10). uroporphyrinogen III decarboxylase *(HEME). EC_4.1 carbon-carbon lyase 0.7921047782760005 71 Bra013218 not classified 0.7919768058877064 72 Bra008961 not classified PPD5 0.7914310938961702 73 Bra040120 ribose 5-phosphate isomerase. EC_5.3 intramolecular oxidoreductase. ribose 5-phosphate isomerase EMB3119 0.7912100426239929 74 Bra037389 protein involved in ferredoxin-NADP oxidoreductase membrane-tethering *(TROL) TROL 0.7903669507389178 75 Bra034731 not classified PGKp1, PGK1 0.7887580793817481 76 Bra027017 not classified 0.7884039978003851 77 Bra038646 glutamate-1-semialdehyde-2,1-aminomutase *(GSA). EC_5.4 intramolecular transferase GSA1 0.7877504507866387 78 Bra034781 not classified EngA-1, DER, emb2738 0.7873529570687289 79 Bra036763 component *(bL21c) of large plastid ribosomal-subunit proteome RPL21C, ASD 0.7872468807661308 80 Bra028666 porphobilinogen deaminase *(HEMC). EC_2.5 transferase transferring alkyl or aryl group, other than methyl group HEMC, RUG1 0.7867824627019909 81 Bra030537 protein involved in PS-II assembly *(Psb27) PSB27 0.7867393076568192 82 Bra020926 translation elongation factor *(EF-Tu) SVR11, RAB8D, ATRAB8D, ATRABE1B, RABE1b 0.7863959578524853 83 Bra025534 component *(bL27c) of large plastid ribosomal-subunit proteome PRPL27, RPL27 0.7852887509686642 84 Bra025013 endoribonuclease *(SOT1) SOT1 0.7843976200306508 85 Bra000285 component *(uL3c) of large plastid ribosomal-subunit proteome PRPL3 0.7842015762883916 86 Bra015850 component *(bL31c) of large plastid ribosomal-subunit proteome emb2184 0.7841267263601231 87 Bra040630 not classified 0.7840599676954841 88 Bra033029 component *(bL12c) of large plastid ribosomal-subunit proteome RPL12-A, RPL12 0.7833954560069374 89 Bra019193 acyl carrier protein *(ptACP)) ACP4, AtACP4 0.7820162341937081 90 Bra008766 component *(uS13c) of small plastid ribosomal-subunit proteome EMB3137 0.7817559220567872 91 Bra009334 porphobilinogen deaminase *(HEMC). EC_2.5 transferase transferring alkyl or aryl group, other than methyl group HEMC, RUG1 0.7816072884765106 92 Bra016977 dihydroxyacetone phosphate reductase *(SFD1). EC_1.1 oxidoreductase acting on CH-OH group of donor GLY1, SFD1 0.7815646478877036 93 Bra008876 dicarboxylate:malate antiporter *(DIT) DiT1 0.7814038981919416 94 Bra031870 component *(uL29c) of large plastid ribosomal-subunit proteome PRPL29 0.781304582444455 95 Bra019926 not classified emb2004 0.7812597771268984 96 Bra039488 assembly factor CCB3 of CCB cytochrome b6 maturation system (system IV) CCB3, atylmg3, YLMG3 0.7810714370353855 97 Bra006182 EC_5.2 cis-trans-isomerase. peptidyl-prolyl cis-trans isomerase. component *(PnsL5) of NDH lumen subcomplex L CYP20-2, Pnsl5, ATCYP20-2 0.7785271161333827 98 Bra016672 not classified FNRL 0.7776450175426586 99 Bra017321 plastidial ribonucleoprotein *(CP33b) 0.7775458302773411 100