Sequence Description Alias PCC hrr Bra013018 protein involved in PS-II assembly *(HCF136) HCF136 0.9155969029953916 1 Bra014755 protein involved in PS-II repair *(PPL1) PPL1 0.90293270152015 2 Bra026948 EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor. glyceraldehyde 3-phosphate dehydrogenase *(GAPDH) GAPA-2 0.8720045375985785 3 Bra001747 phosphoglycerate dehydrogenase. EC_1.1 oxidoreductase acting on CH-OH group of donor 3-PGDH, PGDH3 0.8551383215361233 4 Bra013517 component *(PsbQ) of PS-II oxygen-evolving center PSBQ-1, PSBQA, PSBQ 0.8537999950172697 10 Bra016017 not classified 0.8513672455565534 6 Bra015668 plastidial ascorbate peroxidase *(APX). EC_1.11 oxidoreductase acting on peroxide as acceptor TAPX 0.8342354931742202 10 Bra029188 assembly factor involved in RuBisCo assembly *(RAF2) ATP1, SDIRIP1, RAF2 0.8338387901833696 27 Bra022369 component *(Tic62) of inner envelope TIC translocation system. protein involved in ferredoxin-NADP oxidoreductase membrane-tethering *(TIC62) Tic62, AtTic62 0.8336936312736277 11 Bra025431 small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer DEG24, RBCS2B 0.8287399576088995 23 Bra017269 mTERF-type transcription factor mTERF 3, EMB3114, SL1 0.8235986413892544 11 Bra020809 protein involved in PS-II assembly *(HCF244) HCF244 0.8220413935989954 29 Bra035392 plastidial glutamine synthetase *(GLN2). EC_6.3 ligase forming carbon-nitrogen bond GLN2, GS2, ATGSL1 0.8205725138574854 13 Bra003221 EC_3.1 hydrolase acting on ester bond. sedoheptulose-1,7-bisphosphatase SBPASE 0.8157616778655288 15 Bra020978 protein involved in PS-II assembly *(PAM68) PAM68 0.8122858802072579 15 Bra005037 component *(PnsL1) of NDH lumen subcomplex L PnsL1, PPL2 0.8117282370246888 16 Bra013527 assembly factor CRR9 involved in NDH complex assembly CRR9 0.8099348325662399 17 Bra028181 small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer DEG24, RBCS2B 0.8003458431597898 18 Bra000687 subunit delta of peripheral CF1 subcomplex of ATP synthase complex PDE332, ATPD 0.7988070030681736 39 Bra020038 ROP-activating protein *(RenGAP) PHGAP2 0.7961074019216422 20 Bra025037 phosphometabolite transporter *(TPT/PPT/GPT/XPT). triose phosphate:phosphate translocator APE2, TPT 0.7939888631089954 32 Bra024300 not classified 0.7915351707234956 25 Bra039115 peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38). EC_5.2 cis-trans-isomerase. protein involved in PS-II assembly *(CYP38) CYP38, ATCYP38 0.7889539415334079 39 Bra012595 EC_6.6 ligase forming nitrogen-metal bond. component *(CHLI) of magnesium-chelatase complex CHL11, CH-42, LOST1, CH42, CHLI-1, CHLI1 0.7885571260148779 24 Bra029140 assembly factor CRR1 involved in NDH complex assembly CRR1 0.7881842374964768 52 Bra014663 component *(cL37) of large plastid ribosomal-subunit proteome PSRP5 0.787627326324962 26 Bra034863 delta-12/delta-15 fatty acid desaturase FAD7, AtFAD7, FADD 0.7873147327262245 27 Bra039091 component *(bS21c) of small plastid ribosomal-subunit proteome GHS1, LPE2, RPS21 0.786938070033329 67 Bra015164 not classified 0.7865025084451759 29 Bra033412 protein involved in PS-II assembly *(Psb27) PSB27 0.781825210064275 62 Bra016134 protein involved in PS-II assembly *(Psb33) PSB33, LIL8 0.7817705760607833 37 Bra015850 component *(bL31c) of large plastid ribosomal-subunit proteome emb2184 0.7794263971214086 52 Bra007750 component *(PetM/VII) of cytochrome b6/f complex PetM 0.7792502685891015 42 Bra016989 EC_4.1 carbon-carbon lyase. uroporphyrinogen III decarboxylase *(HEME) HEME2 0.7757148576050614 34 Bra015315 not classified 0.7730458363998772 35 Bra016672 not classified FNRL 0.770699312723562 36 Bra003053 not classified TL17 0.7694834964073574 37 Bra017055 ATP-dependent activase involved in RuBisCo regulation RCA 0.7678567726882587 53 Bra013314 component *(CHLI) of magnesium-chelatase complex. EC_6.6 ligase forming nitrogen-metal bond CHL11, CH-42, LOST1, CH42, CHLI-1, CHLI1 0.7674048040471158 78 Bra004077 protein involved in PS-II assembly *(HHL1) HHL1 0.7661463761428229 40 Bra016889 not classified 0.7626290785336316 41 Bra039094 not classified 0.7613791973039011 42 Bra033982 component *(PsbY) of PS-II complex YCF32, PSBY 0.760379506282812 43 Bra009299 protein involved in photoprotection *(MPH1) MPH1 0.7600491698086937 67 Bra039227 component *(bL35c) of large plastid ribosomal-subunit proteome PRPL35 0.7591240013274871 63 Bra001003 phosphometabolite transporter *(TPT/PPT/GPT/XPT) PPT2, ATPPT2 0.7572159415997956 46 Bra018849 not classified 0.7566264168044278 47 Bra010351 glutaredoxin GrxC5 0.7566209316886542 48 Bra035054 component *(uL13c) of large plastid ribosomal-subunit proteome emb1473 0.7522956851947092 50 Bra025305 component *(bL12c) of large plastid ribosomal-subunit proteome RPL12-A, RPL12 0.7522936576481705 51 Bra001809 component *(PsbTn) of PS-II complex PSBTN 0.751231985432122 68 Bra031147 regulatory protein *(THF1) of thylakoid biogenesis THF1, PSB29 0.7511915227480044 66 Bra036739 LHC-related protein *(OHP2) OHP2 0.7509088782681176 54 Bra007192 EC_3.1 hydrolase acting on ester bond. sedoheptulose-1,7-bisphosphatase SBPASE 0.7497970293693181 55 Bra027877 glutamyl-tRNA reductase *(HEMA). EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor HEMA1, GluTR, AtHEMA1 0.7480913111884777 56 Bra034927 glyceraldehyde 3-phosphate dehydrogenase *(GAPDH). EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor GAPB 0.7472097651383683 57 Bra039342 EC_2.7 transferase transferring phosphorus-containing group. phosphoglycerate kinase. phosphoglycerate kinase PGKp1, PGK1 0.7427744178446817 59 Bra037364 component *(uL5c) of large plastid ribosomal-subunit proteome CBE1 0.7416583878385079 59 Bra027754 manganese/calcium cation transporter *(BICAT) BICAT1, PAM71, CCHA1 0.7374096729887346 86 Bra007994 histidinol-phosphate aminotransferase. EC_2.6 transferase transferring nitrogenous group HISN6B 0.7373728504560924 62 Bra036365 EC_1.11 oxidoreductase acting on peroxide as acceptor. atypical 2-Cys peroxiredoxin *(PrxQ) ATPRX Q, PRXQ 0.7361232969946919 85 Bra010852 component *(bL34c) of large plastid ribosomal-subunit proteome PRPL34 0.7357628494256471 64 Bra018642 not classified 0.7341447640026656 73 Bra024365 not classified 0.7331548262364816 66 Bra032098 not classified 0.7331548262364816 67 Bra020772 not classified 0.7304301404521649 68 Bra014106 component *(cpSRP43) of thylakoid membrane SRP insertion system CAO, CPSRP43 0.7285780323220937 70 Bra036258 photosynthetic acclimation MPH2 acclimation factor MPH2 0.7270419097127985 72 Bra017964 valine/leucine/isoleucine aminotransferase. EC_2.6 transferase transferring nitrogenous group. valine/leucine/isoleucine aminotransferase. branched-chain aminotransferase *(BCAT) BCAT3, ATBCAT-3 0.7240501320183828 76 Bra034761 light-responsive regulatory protein *(SEP4) 0.7236205588313894 77 Bra040103 not classified 0.7222653003001986 78 Bra021450 protease *(Deg) DEG2, DEGP2, EMB3117 0.7210531602746814 91 Bra023936 not classified 0.7209390929666843 80 Bra034200 Rieske iron-sulfur component *(PetC) of cytochrome b6/f complex. EC_1.10 oxidoreductase acting on diphenol or related substance as donor PGR1, PETC 0.7196985505891194 83 Bra035883 plastidial nitrite transporter *(NITR2) AtNITR2;1 0.7182280910060873 85 Bra000915 component *(SecA1) of thylakoid membrane Sec1 translocation system SECA1, AGY1, AtcpSecA 0.7182272313927863 88 Bra018565 endoribonuclease *(CSP41) CRB, CSP41B, HIP1.3 0.7181605709750056 92 Bra024139 atypical thioredoxin *(ACHT) ACHT2 0.7180017235044159 88 Bra014841 EC_3.1 hydrolase acting on ester bond. fructose-1,6-bisphosphatase HCEF1, cfbp1 0.7163095530440089 90 Bra003776 component *(uS9c) of small plastid ribosomal-subunit proteome TWN3, SOT8, RPS9, PRPS9 0.7162744358063646 91 Bra039542 protein involved in PS-I assembly *(PPD1) PPD1 0.714138835747584 92 Bra026314 not classified 0.7132553290833682 93 Bra037997 assembly factor NDF5 involved in NDH complex assembly NDF5 0.7132025249736974 94 Bra038092 carotenoid hydroxylase. EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen CYP97B3 0.7129563718428248 95 Bra030514 protein involved in PS-II assembly *(LPA1) LPA1 0.710469622969609 97 Bra032398 2-succinylbenzoate:CoA ligase *(MenE) AAE14 0.7104149677561994 98 Bra026982 not classified TL20.3 0.7082484180932752 100