Sequence Description Alias PCC hrr Bra015806 component *(VPS35) of Retromer protein recycling complex VPS35B, LAZ4 0.91803745542115 1 Bra004526 substrate adaptor of CUL4-based E3 ubiquitin ligase complex 0.9102082487079366 12 Bra035110 not classified EMB1135, FGT1 0.9088171281653556 5 Bra037086 class-III histone methyltransferase *(Trx) ATXR3, SDG2 0.9037867189134297 7 Bra015251 Nonsense-Mediated mRNA Decay kinase *(SMG1) 0.9037390257993769 9 Bra024486 SAGA complex assembly platform component *(TRA1). component *(TRA1) of SAGA transcription co-activator complex TRA1a 0.9035822561962906 6 Bra026738 cohesin cofactor *(PDS5) PDS5E, AtPDS5E 0.901698028189766 13 Bra039947 regulatory protein *(TIC) of circadian clock TIC 0.9006533067518443 8 Bra035877 regulatory protein *(SUO) of miRNA biogenesis pathway SUO 0.9000332028472232 10 Bra039647 phosphatidylinositol kinase component *(TOR) of TORC complex TOR 0.8973470573469513 21 Bra027850 E3 ubiquitin ligase *(UPL1) UPL1 0.8964845821273346 33 Bra008693 adherin *(SCC2) EMB2773, ATSCC2, SCC2 0.894417014713465 21 Bra004420 component *(SCC3) of cohesin regulator complex. component *(TRAPPC13) of TRAPP complex SCC3, ATSCC3 0.892460550435502 13 Bra035499 component *(HAF/TAF1) of TFIId basal transcription regulation complex. component *(HAF/TAF1) of SAGA transcription co-activator complex GTD1, HAF01, HAF1, HAC13, TAF1 0.8909525073983814 22 Bra036737 component *(UPF3) of RNA quality control Exon Junction complex UPF3, ATUPF3 0.8898111852802253 32 Bra039167 regulatory protein *(BIG) of auxin transport CRM1, ASA1, BIG, DOC1, TIR3, UMB1, LPR1 0.8887022889145324 26 Bra039332 not classified 0.8858937404313982 17 Bra021077 regulatory protein *(RGG) of mRNA quality control AtRGGA 0.8852890723918502 18 Bra021982 not classified 0.8846712630129643 19 Bra020213 component *(DDP) of ISWI chromatin remodeling complex. PHD finger transcription factor DDP2 0.884432516183591 31 Bra019996 not classified SPF1, ASP1 0.8844069522256743 40 Bra029974 transcription factor 0.8840883745986254 30 Bra007105 E3 ubiquitin ligase PUB14, ATPUB14 0.8834845454255966 46 Bra027121 phosphatidylinositol 4-phosphate 5-kinase *(PIP5K). EC_2.7 transferase transferring phosphorus-containing group PIP5K8 0.8826057194735919 24 Bra029406 component *(TFC1/Tau95) of TFIIIc transcription factor complex 0.8822254235193076 25 Bra009411 component *(VPS36) of ESCRT-II complex VPS36 0.8817176475561516 74 Bra029333 RNA helicase *(Brr2) BRR2c 0.881070003634258 90 Bra020751 ATPase component *(CHR11/CHR17) of ISWI chromatin remodeling complexes CHR11 0.8801260754270411 28 Bra004114 component *(SPT6) of SPT6-IWS1 transcription elongation complex SPT6L, GTB1 0.8800173741714841 29 Bra008401 not classified 0.8797706615802449 30 Bra015463 RBR-Ariadne-class E3 ubiquitin ligase ATARI5, ARI5 0.87931544025925 84 Bra039487 EC_2.7 transferase transferring phosphorus-containing group. DYRK protein kinase. protein kinase *(YAK1) YAK1 0.8786957462702959 46 Bra024264 phosphatidylinositol 4-kinase *(PI4K-beta). EC_2.7 transferase transferring phosphorus-containing group PI4KBETA1, PI-4KBETA1 0.8786282224868732 52 Bra037410 CORVET-specific component *(VPS8) of HOPS/CORVET membrane tethering complexes SETH5, VPS8 0.8780826021248783 34 Bra022251 EC_2.7 transferase transferring phosphorus-containing group. MAST protein kinase IREH1 0.8779371595200579 35 Bra034196 HOX-type transcription factor 0.8777582380356576 36 Bra009076 not classified 0.8772587811771452 44 Bra003344 deadenylase component *(CCR4) of mRNA deadenylation CCR4-NOT complex AtCCR4b 0.8767998715180075 38 Bra000409 SMARCA component *(SYD/BRM/MINU) CHA2, BRM, ATBRM, FFO3, CHR2 0.8739143587181045 39 Bra007814 CHD3-type chromatin remodeling factor *(PKL/PKR) SSL2, CHR6, CHD3, GYM, HRB2, EPP1, LWR1, CKH2, PKL 0.873327816570039 40 Bra005578 CTP:phosphorylcholine cytidylyltransferase. EC_2.7 transferase transferring phosphorus-containing group ATCCT1, CCT1 0.872951734191793 71 Bra012785 substrate adaptor *(FBL4) of SCF E3 ubiquitin ligase complex RAD7b 0.8726205947643431 43 Bra015951 component *(TAF2) of TFIId basal transcription regulation complex TAF2 0.8724340779496561 54 Bra037393 not classified 0.8723586833676962 94 Bra024164 bHLH-type transcription factor PFA3, BHLH68 0.8722290554338712 46 Bra027094 not classified 0.87142330290608 47 Bra033187 not classified 0.8708616032972415 77 Bra006346 mitotic-specific Kleisin-type component *(SCC1) of cohesin regulator complex SYN4, ATRAD21.3 0.8698009688159959 51 Bra021945 MAP3K-RAF protein kinase. EC_2.7 transferase transferring phosphorus-containing group 0.8697640494228139 96 Bra037951 component *(EXO84) of Exocyst complex EXO84B 0.8690834155388187 69 Bra003166 peptidyl-prolyl cis-trans isomerase *(PAS) DEI1, PAS1 0.8683185556475532 54 Bra039296 SMARCA component *(SYD/BRM/MINU) CHA2, BRM, ATBRM, FFO3, CHR2 0.8680255487427688 55 Bra039562 class-III histone methyltransferase *(Trx) ATXR3, SDG2 0.8672413713937457 57 Bra024999 class II ARF-GAP ARF-GTPase-activating protein AGD9 0.8649042639667789 59 Bra030896 proteasome assembly quality control factor *(ECM29) 0.8646483699744065 99 Bra003509 component *(ATG18) of autophagosome ATG9-2-18 membrane shuttling complex ATG18a, AtATG18a, PEUP2 0.864295988185391 90 Bra029673 component *(ADA2) of SAGA transcription co-activator complex HAC10, HXA02, ATADA2A, ADA2A, HXA2 0.8636138200358879 63 Bra007788 not classified ISE3 0.8624961211865955 64 Bra019456 endoribonuclease *(DCL3) ATDCL3, DCL3 0.862341060627111 65 Bra036437 substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase complex ATBPM4, BPM4 0.8619111321563548 67 Bra011659 SAGA complex assembly platform component *(TRA1). component *(TRA1) of SAGA transcription co-activator complex TRA1b 0.8612181672914261 69 Bra022624 regulatory protein *(RCF3) of HYL1-phosphorylation SHI1, HOS5, RCF3, ESR1 0.8601129530260371 70 Bra030845 anion channel / anion:proton antiporter *(CLC) CLC-F, ATCLC-F, CLCF 0.8594807623624764 72 Bra009791 not classified SHBY 0.85784297936123 76 Bra027644 histone demethylase *(KDM5) JMJ17 0.8570554495723256 74 Bra036184 transcriptional co-regulator *(Oberon) OBE2 0.8569908174085809 75 Bra022023 scaffold component *(CUL4) of CUL4-DDB1 ubiquitination complexes CUL4, ATCUL4 0.8567612124743114 76 Bra015646 TGA-type transcription factor TGA7 0.8547397017591709 77 Bra017929 component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex. component *(SOP1) of PAXT RNA-exosome-activation complex SOP1 0.8545859360841881 78 Bra037208 CHD1-type chromatin remodeling factor *(CHR5). component *(CHR5) of SAGA transcription co-activator complex CHR5 0.8538802926961205 82 Bra000499 EARP-specific component *(Syndetin-like) of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes 0.8537366986265853 80 Bra012958 not classified 0.853419653884832 81 Bra003063 unfoldase component *(ClpX) of mitochondrion Clp-type protease complex CLPX 0.8531621611830492 82 Bra028743 nucleocytoplasmic export karyopherin *(XPO7) XPO7 0.8531449136600864 83 Bra039049 EC_2.7 transferase transferring phosphorus-containing group. RLCK-VIIa receptor-like protein kinase PBL36 0.8529974668441647 84 Bra012815 component *(PWR) of HDA9-PWR deacetylation complex PWR 0.8529928664587639 85 Bra004260 E3 ubiquitin ligase *(RGLG). E3 ubiquitin ligase *(RGLG) RGLG5 0.8525214421144233 86 Bra010222 clade F phosphatase WIN2 0.8515264976817888 89 Bra023522 adherin *(SCC2) EMB2773, ATSCC2, SCC2 0.8512269807360491 91 Bra030724 phosphatase *(PPKL). regulatory protein phosphatase *(BSL). brassinosteroid signalling protein phosphatase *(BSU/BSL). EC_3.1 hydrolase acting on ester bond BSL2 0.8507707898372854 92 Bra011524 RBR-Ariadne-class E3 ubiquitin ligase ARI1, ATARI1 0.8504449634006699 93 Bra004271 not classified AtSTAR1, NAP3, ATNAP3, ABCI17 0.8498197988139473 94 Bra040930 EC_2.7 transferase transferring phosphorus-containing group PBL37 0.8497873947586355 95 Bra028312 GRAS-type transcription factor SCL8 0.8497265105587127 96 Bra000304 component *(U11-35K) of U11 snRNP complex 0.8495183080298424 98 Bra000294 EC_5.4 intramolecular transferase 0.8494652329675642 99 Bra035582 chromatin architectural modulator *(DEK) 0.8486734404859677 100