Sequence Description Alias PCC hrr Bra011081 EC_6.1 ligase forming carbon-oxygen bond. translation elongation factor *(EF-Ts). aspartate-tRNA ligase 0.9109299276819016 1 Bra029140 assembly factor CRR1 involved in NDH complex assembly CRR1 0.8997860576728407 2 Bra007282 component *(cL37) of large plastid ribosomal-subunit proteome PSRP5 0.8925053007760654 3 Bra038389 not classified CP33C 0.8681355899128806 4 Bra029188 assembly factor involved in RuBisCo assembly *(RAF2) ATP1, SDIRIP1, RAF2 0.8648774581253865 10 Bra033412 protein involved in PS-II assembly *(Psb27) PSB27 0.8648028372294834 7 Bra002424 component *(Tic100) of inner envelope TIC-20 complex TIC100, emb1211 0.8612081889656135 7 Bra014681 not classified PPD6 0.8596539094085741 17 Bra015850 component *(bL31c) of large plastid ribosomal-subunit proteome emb2184 0.856559925779589 9 Bra040427 translation ribosome recycling factor *(RRF) cpRRF, HFP108, AtcpRRF, RRF 0.8557255902690223 25 Bra039542 protein involved in PS-I assembly *(PPD1) PPD1 0.855718569651046 11 Bra034277 organellar tryptophan-tRNA ligase OVA4 0.8539551491540054 12 Bra010483 plastidial ribonucleoprotein *(CP31) ATRBP33, ATRBP31, CP31A, RBP31, CP33a, CP31 0.8538258874992635 16 Bra016977 dihydroxyacetone phosphate reductase *(SFD1). EC_1.1 oxidoreductase acting on CH-OH group of donor GLY1, SFD1 0.8474277786227371 14 Bra027273 component *(bS20c) of small plastid ribosomal-subunit proteome PRPS20 0.8434398053217701 43 Bra033596 splicing factor *(CFM4) CFM4 0.8420289215543328 16 Bra037439 isoleucine-tRNA ligase. EC_6.1 ligase forming carbon-oxygen bond OVA2 0.8375194133946657 17 Bra002101 nucleotide exchange factor *(CGE) CGE1, EMB1241 0.8372488618505677 18 Bra035865 not classified EMB2759 0.8362299266251971 19 Bra040773 component *(bL34c) of large plastid ribosomal-subunit proteome PRPL34 0.831645169666656 43 Bra035563 nascent polypeptide chaperone *(TIG) HP65b, TIG1 0.8307636558578678 43 Bra011770 ribonuclease *(RNC1) 0.8305835403644488 22 Bra010351 glutaredoxin GrxC5 0.8294891763836176 23 Bra011565 rbcL-mRNA stability factor *(MRL1) PDE346, MRL1 0.8288711439920375 24 Bra033438 plastidial ribonucleoprotein *(CP33a) PDE322, CP33 0.8270131851314144 26 Bra007655 EC_5.2 cis-trans-isomerase. peptidyl-prolyl cis-trans isomerase ROC4, CYP20-3 0.8264627790788761 26 Bra013527 assembly factor CRR9 involved in NDH complex assembly CRR9 0.8248492637631325 27 Bra039091 component *(bS21c) of small plastid ribosomal-subunit proteome GHS1, LPE2, RPS21 0.8241671766466377 34 Bra013517 component *(PsbQ) of PS-II oxygen-evolving center PSBQ-1, PSBQA, PSBQ 0.8239935977153018 29 Bra006622 not classified 0.8234023782920811 30 Bra015574 component *(uL4c) of large plastid ribosomal-subunit proteome RPL4, PRPL4, EMB2784 0.8233747472395776 54 Bra032984 component *(bS21c) of small plastid ribosomal-subunit proteome GHS1, LPE2, RPS21 0.8232879987661306 40 Bra007055 component *(bL17c) of large plastid ribosomal-subunit proteome PRPL17 0.8226497994655192 64 Bra015397 component *(uL6c) of large plastid ribosomal-subunit proteome RPL6, EMB2394 0.8188114623164126 46 Bra027163 RlmN-type rRNA methyltransferase 0.8173367347169715 35 Bra016123 mRNA chaperone *(RLSB/BSF) PBR1, BSF, RLSB, PDE338 0.8158880777537608 36 Bra014755 protein involved in PS-II repair *(PPL1) PPL1 0.8157062629422263 37 Bra021879 component *(uS5c) of small plastid ribosomal-subunit proteome SCA1, RPS5, EMB3113, PRPS5 0.8155277695762606 57 Bra000791 leucine-tRNA ligase EMB2369 0.8149741763623828 39 Bra022593 component *(cpTatB) of thylakoid membrane Tat translocation system. protein involved in PS-II assembly *(HCF106) HCF106 0.8126316105821704 40 Bra033287 not classified 0.8091689111707934 41 Bra013018 protein involved in PS-II assembly *(HCF136) HCF136 0.8059809834234005 42 Bra015668 plastidial ascorbate peroxidase *(APX). EC_1.11 oxidoreductase acting on peroxide as acceptor TAPX 0.8059707790688658 43 Bra009965 not classified 0.8029448797541406 45 Bra037609 component *(bL9c) of large plastid ribosomal-subunit proteome RPL9 0.7979872266089346 66 Bra008373 component *(uL13c) of large plastid ribosomal-subunit proteome emb1473 0.7968635868982962 50 Bra011679 not classified 0.7941214675188413 47 Bra002973 component *(uL24c) of large plastid ribosomal-subunit proteome RPL24, SVR8 0.7938397794237179 48 Bra008766 component *(uS13c) of small plastid ribosomal-subunit proteome EMB3137 0.792596114063571 49 Bra019193 acyl carrier protein *(ptACP)) ACP4, AtACP4 0.7901677632269622 63 Bra036258 photosynthetic acclimation MPH2 acclimation factor MPH2 0.790153946125696 51 Bra008876 dicarboxylate:malate antiporter *(DIT) DiT1 0.7895022249637672 54 Bra016989 EC_4.1 carbon-carbon lyase. uroporphyrinogen III decarboxylase *(HEME) HEME2 0.788237315529719 53 Bra010498 chaperone *(cpHsc70)) cpHsc70-1 0.7871586702236554 54 Bra027196 initiation factor *(MFP1) MFP1 0.7866642659041313 55 Bra039115 peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38). EC_5.2 cis-trans-isomerase. protein involved in PS-II assembly *(CYP38) CYP38, ATCYP38 0.7860754510377271 56 Bra030514 protein involved in PS-II assembly *(LPA1) LPA1 0.7857491196960888 57 Bra003028 not classified EMB2737, ANU7, EMB64 0.782998403332439 58 Bra040120 ribose 5-phosphate isomerase. EC_5.3 intramolecular oxidoreductase. ribose 5-phosphate isomerase EMB3119 0.7822715409060276 59 Bra023302 component *(uL11c) of large plastid ribosomal-subunit proteome PRPL11 0.7819533610797348 60 Bra025534 component *(bL27c) of large plastid ribosomal-subunit proteome PRPL27, RPL27 0.7812856884565582 61 Bra013314 component *(CHLI) of magnesium-chelatase complex. EC_6.6 ligase forming nitrogen-metal bond CHL11, CH-42, LOST1, CH42, CHLI-1, CHLI1 0.7808032543542732 67 Bra021936 protein involved in PS-I assembly *(PSA2) PSA2, EDA3 0.7804994636089482 63 Bra003776 component *(uS9c) of small plastid ribosomal-subunit proteome TWN3, SOT8, RPS9, PRPS9 0.7803996535483441 64 Bra003176 component *(bL17c) of large plastid ribosomal-subunit proteome PRPL17 0.7803844037837356 65 Bra007548 CDP-diacylglycerol synthase *(CDS) CDS5 0.7800790548982726 66 Bra039488 assembly factor CCB3 of CCB cytochrome b6 maturation system (system IV) CCB3, atylmg3, YLMG3 0.7786135662794708 67 Bra015023 EC_4.2 carbon-oxygen lyase. dihydroxy-acid dehydratase. dihydroxy-acid dehydratase DHAD 0.7782966879115557 68 Bra007404 ketol-acid reductoisomerase. ketol-acid reductoisomerase. EC_1.1 oxidoreductase acting on CH-OH group of donor 0.7781507646624979 69 Bra039227 component *(bL35c) of large plastid ribosomal-subunit proteome PRPL35 0.7772252543861632 70 Bra027670 monodehydroascorbate reductase *(MDAR). EC_1.6 oxidoreductase acting on NADH or NADPH MDAR6 0.7764462661211208 71 Bra040448 component *(uL1c) of large plastid ribosomal-subunit proteome EMB3126, PRPL1 0.7758636243689803 72 Bra006248 component *(uS13c) of small plastid ribosomal-subunit proteome EMB3137 0.7749646683948161 97 Bra030537 protein involved in PS-II assembly *(Psb27) PSB27 0.7743026915024853 74 Bra021042 component *(bL19c) of large plastid ribosomal-subunit proteome 0.7717202227803244 75 Bra016672 not classified FNRL 0.7689211583079416 76 Bra027021 translation elongation factor *(EF-G) ATSCO1/CPEF-G, ATSCO1, SCO1 0.768571636608479 77 Bra006352 biotin carboxyl carrier component of polymeric acetyl-CoA carboxylase complex CAC1-A, CAC1A, CAC1, BCCP1, BCCP, BCCP-1 0.7671657147717929 78 Bra012595 EC_6.6 ligase forming nitrogen-metal bond. component *(CHLI) of magnesium-chelatase complex CHL11, CH-42, LOST1, CH42, CHLI-1, CHLI1 0.7656285333859097 79 Bra027294 Rab GTPase-activating protein *(RabGAP10). uroporphyrinogen III decarboxylase *(HEME). EC_4.1 carbon-carbon lyase 0.7650952314247934 80 Bra039665 not classified 0.7645219304865543 81 Bra000036 deubiquitinase *(OTU3-4) OTU3 0.763605259510939 82 Bra034761 light-responsive regulatory protein *(SEP4) 0.7629958915664237 83 Bra039904 not classified 0.7628734844833833 84 Bra027235 peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) 0.7610052537800692 85 Bra003053 not classified TL17 0.7608544245779643 86 Bra014106 component *(cpSRP43) of thylakoid membrane SRP insertion system CAO, CPSRP43 0.7607242414813092 87 Bra013218 not classified 0.7595922148331722 88 Bra036261 component *(Toc90/120/132/159) of outer envelope TOC translocation system TOC86, ATTOC159, TOC160, PPI2, TOC159 0.7590917360985646 89 Bra016134 protein involved in PS-II assembly *(Psb33) PSB33, LIL8 0.7588726692698835 90 Bra031893 not classified 0.7584135938211498 92 Bra007750 component *(PetM/VII) of cytochrome b6/f complex PetM 0.7578669247548223 93 Bra003835 peptidyl-prolyl cis-trans isomerase *(FKBP17-2/3) 0.7567159891322481 94 Bra039494 translation peptide chain release factor *(PrfB) HCF109, ATPRFB 0.7564576820119439 95 Bra039224 stromal sorting factor of thylakoid membrane SRP insertion system *(STIC2) STIC2 0.7558847438163794 97 Bra040103 not classified 0.7556081391239117 98 Bra015164 not classified 0.7552089777294597 99 Bra017269 mTERF-type transcription factor mTERF 3, EMB3114, SL1 0.7547991800753829 100