Heatmap: Cluster_562 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-0.77 -1.62 -0.4 -1.2 -0.11 -0.95 -0.79 -0.14 -0.27 0.24 -0.0 -0.07 0.24 0.32 0.3 0.48 -0.32 1.05 0.25 -0.04 -0.02 -0.44 1.3 0.09 0.4 -0.06 -0.28 -0.06 -0.41 -0.11 -0.1
- - - -0.1 -1.19 - - - -2.41 0.61 -0.84 -0.12 1.55 1.18 0.44 0.22 0.29 1.8 -0.76 -0.05 -0.53 -2.03 2.63 -1.22 0.76 0.89 -0.52 -2.03 - - -1.3

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.