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Heatmap: Cluster_558 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
0.71 -0.1 0.04 0.43 0.42 0.86 -0.43 -0.83 -0.35 0.88 -5.62 -0.34 -3.61 -0.81 0.45 0.32 0.71 -1.22 -0.86 0.24 -4.38 -0.03 0.15 0.32 0.44 0.33 0.23 0.31 -0.25 -0.69 0.3
Bra008673 (HCF222)
 0.13 -0.11 0.13 0.11 0.34 0.55 -0.15 0.42 -0.51 -0.33 -0.39 -0.37 -0.21 0.04 0.28 -0.0 0.35 -0.51 -0.2 0.52 0.09 0.2 -0.27 0.2 0.09 0.02 0.07 -0.34 -0.3 -0.58 -0.27

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.