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Heatmap: Cluster_432 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-1.26 -0.25 -1.82 -1.23 - - - - -1.47 - 0.55 - -0.36 0.77 -1.26 -1.34 - -0.65 - - 1.06 - -0.51 - 1.78 0.02 0.51 1.45 1.39 2.87 0.94
-1.33 -1.12 -0.13 -0.89 0.19 -0.03 -0.8 -1.2 0.26 0.14 -0.34 0.42 0.61 0.44 0.62 -0.01 -0.14 1.04 -0.43 -0.51 -0.4 -0.18 0.41 -0.13 0.1 -0.25 -0.23 -0.25 0.08 0.72 0.15
-1.24 - -1.7 -1.07 0.03 -0.66 -0.87 -2.65 -0.76 -1.6 0.21 1.02 0.38 -2.52 - 0.41 -0.97 1.02 -0.23 -1.58 -0.04 -1.77 1.09 0.16 0.61 -0.17 0.6 0.42 0.36 2.27 -0.12
-2.31 -0.35 -0.41 -2.45 0.01 -1.14 -3.39 -1.15 -1.08 -1.37 -2.07 0.04 0.41 -0.39 0.3 0.57 0.19 1.9 -0.61 -1.24 -2.67 -0.6 0.97 -0.18 0.15 0.71 0.1 -1.06 0.13 2.08 -0.11

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.