Heatmap: Cluster_415 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra008455 (TRM2a)
0.89 0.1 0.9 0.5 2.12 1.22 0.28 -0.99 -0.4 -0.02 -1.22 -0.02 -0.11 -2.59 -1.94 -0.63 -0.88 -2.23 -0.1 -1.46 -0.62 -0.19 -0.97 -4.48 -0.44 -0.57 -0.42 0.46 0.59 0.12 -0.02
Bra019367 (TRM2a)
0.89 0.1 0.9 0.5 2.12 1.22 0.28 -0.99 -0.4 -0.02 -1.22 -0.02 -0.11 -2.59 -1.94 -0.63 -0.88 -2.23 -0.1 -1.46 -0.62 -0.19 -0.97 -4.48 -0.44 -0.57 -0.42 0.46 0.59 0.12 -0.02

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.