Heatmap: Cluster_402 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
- - - - - -1.19 -0.66 -0.21 0.85 0.36 0.26 -0.35 0.34 0.99 1.26 -0.36 0.41 0.46 -0.33 -0.15 -0.42 0.12 0.29 -0.19 -0.05 -0.03 -0.35 0.15 0.31 0.63 1.39
Bra027844 (CW9)
-1.14 -1.41 -1.23 -2.16 -0.95 1.15 -1.05 -1.81 0.6 -2.89 -0.21 -0.22 -0.59 1.25 -0.63 -0.79 -0.77 -0.51 -0.79 -0.61 -0.51 0.81 0.65 1.0 0.73 -0.75 -0.05 0.7 1.34 0.41 0.15
-1.52 -2.45 -2.35 -3.01 -0.26 0.14 -1.18 -1.47 0.79 -1.74 0.01 -1.74 -1.09 1.26 1.1 -0.22 -0.09 -1.37 0.74 0.02 -0.96 0.87 -1.72 0.93 0.61 0.08 0.49 0.54 0.96 0.19 0.15
-3.06 - -3.91 - -2.05 -0.64 -0.84 0.54 1.02 -1.21 -0.17 0.11 -0.12 1.74 0.57 0.84 0.1 -0.82 0.29 0.29 0.01 0.87 -0.9 0.13 0.23 -0.8 0.19 -0.34 0.22 0.03 0.63
Bra041069 (NUA)
-1.35 -1.65 -0.72 -2.85 -0.08 0.79 -1.35 -0.72 0.78 -0.68 -1.6 -0.55 -0.55 1.19 0.9 0.21 -0.46 -0.3 -0.73 0.24 -0.73 0.42 0.45 0.17 0.69 0.24 0.6 0.47 0.53 -0.02 -0.62

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.