Heatmap: Cluster_693 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra003123 (AtCDC48B)
-1.24 - -2.75 - -1.01 0.34 -1.7 - - - - - 0.36 1.57 1.58 -2.38 - 3.04 - - -1.01 -0.71 2.77 -1.08 -0.06 - -1.67 0.2 0.19 -2.51 -0.81
Bra019277 (DIR6)
-0.08 -1.38 -0.69 -0.91 -0.39 -0.57 -0.46 -0.77 -1.22 -1.12 -0.09 -0.91 0.11 0.84 0.92 -0.0 -0.41 1.46 -0.34 -0.69 -0.91 -0.58 1.03 0.33 0.07 0.19 0.09 0.46 0.32 0.04 0.41

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.