Heatmap: Cluster_552 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
0.94 0.69 0.42 0.76 -0.75 1.12 1.1 0.43 -0.35 -0.22 1.06 -0.98 -0.19 -0.7 -0.63 0.02 -0.54 -0.13 0.61 0.73 -1.21 -1.49 -2.46 -0.46 -0.41 -1.31 -0.53 -0.84 -0.95 -0.65 -0.43
Bra035943 (HDA5)
0.47 0.19 0.43 0.68 -0.08 -0.41 0.47 0.84 -0.05 -0.37 0.77 0.55 -0.18 -0.66 -0.07 0.46 -0.42 -1.69 0.67 0.11 -0.37 -0.01 -1.15 -0.49 -0.55 -0.83 -0.59 -0.06 -0.22 -0.28 -0.55

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.