Heatmap: Cluster_899 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-0.93 -0.75 -0.77 -0.88 0.67 0.43 -0.63 -0.95 0.02 0.21 0.23 -0.2 -0.05 0.29 0.33 0.34 0.02 0.68 -0.01 0.04 -0.23 -0.4 -0.06 -0.31 -0.24 0.34 -0.24 0.89 -0.06 0.15 -0.28
-0.11 -2.18 - - 0.83 1.25 -2.72 -3.49 -0.16 -0.13 0.21 -0.52 0.96 0.9 0.92 -0.55 -1.14 1.67 -0.26 -2.57 -2.57 -0.84 -1.13 -0.82 0.18 -0.38 -0.56 1.74 1.27 -0.72 -3.72

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.