Heatmap: Cluster_329 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
0.92 0.54 0.37 0.97 0.9 0.4 0.07 -0.66 -0.39 0.23 -0.42 -0.13 -1.77 -1.05 -0.94 -0.33 -0.27 -0.58 -0.84 -0.62 0.08 -0.2 -2.24 -0.23 -0.07 0.45 0.44 0.22 0.38 0.46 -0.63
0.95 0.77 0.97 1.16 0.92 0.52 0.1 -0.56 -0.4 0.24 -0.31 -0.26 -1.63 -1.58 -1.0 -0.5 -0.43 -0.75 -0.45 -0.38 0.17 -0.11 -3.04 -0.19 -0.08 0.14 0.06 0.2 0.05 0.11 -1.43
1.24 1.02 0.83 1.31 1.02 0.64 0.04 -0.63 -0.92 -0.02 -0.53 -0.18 -1.4 -1.0 -0.7 -0.33 -0.18 -0.46 -0.56 -0.71 -0.08 -0.06 -2.96 -0.35 -0.22 0.24 -0.32 -0.56 -0.22 0.05 -0.8
Bra028010 (5PTase14)
0.79 1.1 0.45 0.58 1.05 0.67 0.47 -0.44 -0.33 0.09 -0.75 0.05 -0.79 -0.63 -0.31 -0.02 0.01 -0.31 -0.6 -0.45 0.35 -0.32 -3.69 -1.14 -0.67 0.01 -0.22 -0.32 0.15 0.14 -0.59
1.02 1.1 0.71 1.22 0.94 0.63 0.15 -0.62 -0.66 -0.12 -0.49 -0.34 -1.66 -1.4 -0.74 -0.19 -0.47 -0.24 -0.62 -0.55 0.17 -0.22 -2.55 -0.39 -0.39 0.24 -0.07 -0.16 -0.0 0.34 -0.91

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.