Heatmap: Cluster_396 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra038444 (COP9)
-0.13 -0.52 -0.51 -0.51 -0.19 -0.07 0.14 0.17 0.09 -0.43 0.33 0.4 0.26 0.21 1.08 0.66 -0.45 0.46 -0.17 0.24 0.12 -0.24 1.07 -0.53 -0.33 -0.88 -0.44 -0.93 -0.95 -0.69 -0.24
- -1.41 -1.87 - - - 0.57 0.17 -0.17 -1.01 1.29 1.04 1.83 0.96 1.62 0.57 0.68 1.51 0.72 -0.22 - -2.55 0.04 -1.98 0.47 - -0.65 -1.78 -3.59 -1.67 -0.53

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.