Heatmap: Cluster_280 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
- - 1.54 - 0.44 -0.68 - -0.8 - 0.27 2.11 1.27 1.2 - - 0.6 1.09 - 1.85 1.44 - 0.98 - - 0.41 - -0.48 - - 0.38 -
Bra034162 (ENGase85B)
- -2.52 - - -2.68 -1.4 1.32 0.18 - 1.07 -0.8 1.08 - -0.3 -0.32 0.44 0.3 1.76 1.04 0.01 -0.05 1.87 -0.11 -0.93 -0.07 -0.98 0.38 -0.55 -1.36 -0.57 -0.65
Bra037895 (STK)
0.84 - - - - 1.24 0.25 - - -0.16 2.06 0.3 - - 0.75 1.43 -0.88 -1.14 2.32 1.59 - 0.94 - -1.07 - - -0.09 0.15 0.62 - -
Bra040721 (PGL1)
0.79 -1.48 1.44 -0.88 1.41 -1.86 -0.44 -2.02 0.54 - 0.06 1.65 0.91 0.3 0.71 0.34 -1.76 -0.25 1.05 1.01 - -1.95 - - -0.31 -0.32 1.27 - - - -0.73

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.