Heatmap: Cluster_600 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
-0.12 -2.6 -1.04 - -0.46 -1.9 -2.58 -1.1 -1.25 -0.49 -1.12 -1.87 1.65 1.17 - -2.68 - 1.69 -0.3 -0.9 0.47 0.05 2.37 -0.1 -2.95 -0.91 -0.95 -2.68 1.58 0.97
- - - - 0.8 - - - - - - - 2.74 - - - - 0.87 - - - - 3.43 - - - - - 2.76 1.15
-1.32 -0.92 -0.96 -1.94 0.84 -0.09 -1.56 -2.58 -1.32 -1.38 -1.26 -1.36 -1.96 -1.61 -1.04 -2.1 -1.79 -3.36 -2.52 -1.98 -1.85 -2.13 3.14 -1.51 -1.2 -1.04 -1.34 -1.11 3.0 0.97
0.19 -0.58 0.64 -0.47 -1.36 0.49 -0.15 -0.39 -0.36 -0.06 -0.63 -0.48 -1.2 -0.74 -2.51 -1.19 -2.26 0.26 0.45 0.63 - - 2.54 0.54 -2.41 -0.99 0.81 -2.06 1.5 -0.76

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.