Heatmap: Cluster_914 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-0.01 -1.18 -2.16 -1.79 -0.59 -1.35 -0.97 -0.54 -0.65 -0.13 -0.0 -0.86 0.81 0.59 0.95 -0.88 -0.73 2.03 -0.33 -0.31 -1.7 -0.51 1.92 -0.86 -1.56 -0.25 -0.58 -0.15 0.23 0.06 0.46
Bra031691 (RAS1)
- - -1.1 -1.8 - -1.37 -1.63 -2.26 -2.76 0.36 -0.21 -0.2 0.56 0.71 1.0 -0.77 -0.6 2.13 -1.93 0.41 -1.59 -1.21 2.48 -1.21 -0.6 0.48 -0.85 -0.62 -2.05 -0.18 1.42

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.