Heatmap: Cluster_665 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra016050 (PBL33)
-3.04 - -0.48 -1.69 2.09 - - -2.52 -1.09 - - -1.37 -2.66 -1.78 -1.54 - - 2.16 - - - -1.5 4.01 -4.48 -1.55 -2.83 -3.41 -2.06 -2.18 -0.76 0.16
Bra025403 (PMAT2)
-0.55 -3.78 -0.55 -1.74 1.43 0.03 -0.08 -1.02 -0.84 -0.23 -1.06 -0.75 -0.16 -0.37 -0.86 -0.42 -0.57 1.31 -0.26 -0.74 -1.63 -0.36 2.68 -0.28 0.18 -0.48 -0.22 -0.75 -0.56 -0.49 0.11

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.