Heatmap: Cluster_705 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra003746 (SAUR51)
-0.16 0.27 0.15 0.08 -0.58 -2.23 -2.78 -0.11 0.03 -2.7 -1.47 -0.22 1.9 -0.67 -0.81 -0.44 -0.0 1.48 -1.72 -1.06 -1.83 -1.37 2.46 -1.67 -0.61 0.56 -2.43 -3.06 -1.21 -0.5 1.07
Bra011461 (AGD2)
0.58 -0.03 0.44 0.34 -0.36 -1.07 -0.79 0.16 -1.14 -0.2 -0.79 -0.13 1.31 -1.27 -0.85 0.28 -0.62 -0.27 -0.01 -1.43 -0.69 -1.21 1.98 -1.47 -0.3 -0.26 -0.31 0.43 0.18 0.11 0.35

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.