1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_420 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra020062 (TUA3)
 0.66 0.55 0.82 0.89 0.19 -0.29 -0.19 0.49 -0.09 -0.14 -0.11 -0.3 -0.09 0.27 0.04 0.34 0.35 0.13 -0.4 -0.15 -0.12 -0.14 -0.03 -0.77 -0.83 -0.14 -0.72 -0.42 -0.8 -0.52 -0.89
Bra033200 (ABHD11)
 0.8 0.63 1.3 0.65 -0.39 -0.37 0.1 0.3 -0.56 -0.1 -0.2 -0.37 0.05 0.08 -0.18 0.16 0.19 -0.07 -0.03 0.16 0.08 -0.0 -1.27 -0.51 -0.29 -0.06 -0.4 -0.41 -0.39 -0.91 -0.85
Bra033201 (ABHD11)
 0.6 0.35 0.81 0.4 -0.12 0.21 0.03 0.26 -0.39 -0.07 -0.2 -0.26 -0.19 -0.12 0.25 0.06 0.02 -0.55 -0.41 -0.09 0.11 -0.24 -1.07 -0.42 -0.31 -0.25 -0.15 0.44 0.41 0.03 -0.74

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.